Open idazucchi opened 7 months ago
next step: nate will prepare a spreadsheet for each project that contains the link uuids and their content this should allow us to indentify the link files for the DCP generated matrices and MVP matrices, and then delete or keep them according to the need of the project
we should also discuss whether we want to keep DCP matrices @gabsie to raise this with Tony
short name: HumanAdultKidneyLiaoMo
uuid: 2ef3655a-973d-4d69-9b41-21fa4041eed7
keep
DCP matrix id (analysis file): d7ae23dc-ed81-5ef9-8ec7-d201a92701c9
DCP matrix links id: 51b7ad62-9f03-5ee1-99a3-e6eb4d54c713
keep all analysis files - they are DCP/2 pipelines products
links for the other pipeline analysis files: 8911c4d5-ddbd-5d9b-8543-c773356386f3
ee80d2e9-76e9-53eb-9d5d-d76b527ddc47
2d9430d0-9d18-55d6-9ff0-089e2d981f0c
delete - highlighted in yellow in the sheet
MVP matrix id (supplementary):bd2f5a03-cc0d-5fe1-a492-fb9045e57f92
MVP matrix links id: 4f2fc365-9f97-51ca-bbfe-fe30cefc333d
links for sequence files: 58693ea7-bb6c-4d4b-bdf2-169183701581
724f1ba8-5a1b-4756-b0d1-8c2fdc92cb6d
c8bb5ce5-7b98-4a7b-aa52-287922f8a9e0
short name: pbmcCov19Flu
uuid: 95f07e6e-6a73-4e1b-a880-c83996b3aa5c
keep
DCP matrix id (analysis file): 038565cd-35e3-5a31-afec-733f86b3317d
DCP matrix links id: a15d888c-a2ef-5ba5-b0fb-a2ecb6c764b1
new contributor matrix id (analysis file): 253b723a-8c4e-43bd-8b77-35f91c16c103
new contributor matrix links id: 3570c9e1-4746-440d-95a6-1229e6f90c2c
delete - highlighted in yellow in the sheet
MVP matrix id (supplementary):e0fb66b9-5c49-5cac-b704-a1fed0eae16d
MVP matrix links id: 21e70ffa-b57c-5087-93d3-c49b9a4fc6d6
waiting for R35 to be up for review to check the projects look ok in the browser
pbmcCov19Flu
--> fixed
HumanAdultKidneyLiaoMo
--> was dropped from R35 because it couldn't be indexed. This happened because the input for the DCP matrices were deleted and the graph couldn't be reconstructed.
We have two options here:
Context
Updating the linking of a project generally requires the project to be soft deleted from Terra, however, it's unclear what effect the soft deletion would have on:
Description of the task:
We need to understand and then record :
Example project - MVP contributor matrices + DCP generated matrices
short name: HumanAdultKidneyLiaoMo uuid:
2ef3655a-973d-4d69-9b41-21fa4041eed7
ingest aim: update linking, keep existing DCP matrices and remove MVP matrices because they have been added to the project as normal analysis filesExample project - MVP contributor matrices + DCP generated matrices
short name: pbmcCov19Flu uuid:
95f07e6e-6a73-4e1b-a880-c83996b3aa5c
ingest aim: remove MVP matrices because they have been added to the project as normal analysis files, keep existing DCP matricesAcceptance criteria for the task