Closed ofanobilbao closed 1 year ago
preparing the fastq files 16c73b63-f679-4f67-9d54-117f588171da
Donor/Specimens there are two kidney transplant receivers that donated part of their transplant kidney (biopsies) I'm not sure if I captured the disease status correctly for the specimen, I tried to capture the health status at the time of the biopsy. (see the result section of the paper)
Great submission! I found only two minor comments.
Protocol ID matrix generation
has spaces
Matrix cell count
has 6001 cells, but matrix contains 6000 cells (first column is gene names)
@gabsie why is this in the stalled column? It is public in DCP already
something has happened here which I have no explanation for :), I wouldn't reopen just like that - no comment as well.
As per Operations Review meeting today, closing as it does not seem as there was anything wrong with this dataset
Project short name:
SuryawanshiKidneyAllografts
Primary Wrangler:
Ida
Secondary Wrangler:
Arsenios
Link to Ingest
Associated files
Published study links
Paper: Detection of infiltrating fibroblasts by single-cell transcriptomics in human kidney allografts
Accessioned data: GSE151671
Key Events