20200518: Update <contains_umi/cell_barcode_info> tests

[ESapenaVentura]

Describe the issue As a data wrangler, I would like to modify the tests that require cell and UMI barcodes when facing non-standard technologies. There is an unexpected issue in which it expects cell barcodes and UMI barcodes for bulk RNA seq and WGS.

Test template

contains_cell_barcode_info.adoc

• Test name: Name doesn't need to be changed
• Test Description: Description doesn't need to be changed
• Cypher query:

  MATCH (p:library_preparation_protocol)
  WHERE NOT p.`library_construction_method.ontology_label` =~ "10[xX] ([35]' ){0,1}v[1-3] sequencing" // 10x v2 and v3
  AND NOT p.`library_construction_method.ontology_label` = "Smart-seq2"
  AND "single" in p.`nucleic_acid_source`
  AND (p.`cell_barcode.barcode_read` is NULL // Which read contains the cell barcode
  OR p.`cell_barcode.barcode_offset` is NULL // Offset of cell barcode
  OR p.`cell_barcode.barcode_length` is NULL)// Length of cell barcode
  RETURN p, "Missing information for cell barcode", labels(p)

contains_umi_barcode_info.adoc

• Test name: Name doesn't need to be changed
• Test Description: Description doesn't need to be changed
• Cypher query:

  MATCH (p:library_preparation_protocol)
  WHERE NOT p.`library_construction_method.ontology_label` =~ "10[xX] ([35]' ){0,1}v[1-3] sequencing" // 10x v2 and v3
  AND NOT p.`library_construction_method.ontology_label` = "Smart-seq2"
  AND "single" in p.`nucleic_acid_source`
  AND (p.`umi_barcode.barcode_read` is NULL  // Which read contains the UMI barcode
  OR p.`umi_barcode.barcode_offset` is NULL  // Offset of the UMI barcode
  OR p.`umi_barcode.barcode_length` is NULL) // Length of the UMI barcode
  RETURN p, "Missing information for UMI barcode", labels(p)

Acceptance criteria

• [x] The test has been reviewed
• [x] The test has been implemented into the graph_test_set folder