NTR: arabinsome polymer

ebi-chebi / ChEBI

Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds.

https://www.ebi.ac.uk/chebi

Creative Commons Attribution 4.0 International

42 stars 10 forks source link

NTR: arabinsome polymer #2773

Open muthuvenkat opened 11 years ago

muthuvenkat commented 11 years ago

text def: "a repeating chain of arabinose monomers"

owl def, something like:

polymer and has_repeating_part some CHEBI;arabinsoe

required to define:

[Term]
id: GO:0042899
namespace: biological_process
def: "The directed movement of an arabinose polymer, a repeating chain of arabinose monomers, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:jl]
is_a: GO:0015751  ! arabinose transport

Reported by: cmungall

muthuvenkat commented 11 years ago

assigned_to: Marcus Ennis

Original comment by: mennis

muthuvenkat commented 11 years ago

Hi Chris

Is this not the same as the existing ChEBI entry for arabinan?

arabinan (CHEBI:22590) is a homopolysaccharide (CHEBI:37164)

(This doesn't currently doesn't have a definition but I have now added "A polysaccharide composed of arabinose residues."

Marcus

Original comment by: mennis

muthuvenkat commented 11 years ago

Hah, it seems we're a little inconsistent in GO. I've bounced this one back to us until we have ourselves sorted out:

https://sourceforge.net/p/geneontology/ontology-requests/10209/

Original comment by: cmungall