ebi-gene-expression-group atlas-bash-util issues

ebi-gene-expression-group / atlas-bash-util

0 stars 0 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Poll Frequency update to reduce status check on SLURM db

#36 anilthanki closed 3 months ago
1
Update `atlas-bash-util` to set time for SLURM job if specified

#35 anilthanki closed 4 months ago
0
to run `sacct` less frequently

#34 pmb59 closed 5 months ago
1
fix documentation regarding memory accepted values

#33 pmb59 closed 8 months ago
0
Correct slurm_monitor_job expected arguments

#32 irisdianauy opened 8 months ago
0
Remove slurm param that sets job group name

#31 irisdianauy closed 9 months ago
0
Fix logPrefix path

#30 irisdianauy closed 9 months ago
0
Makes working dir compulsory for slurm

#29 anilthanki closed 9 months ago
1
if no working dir set then uses current dir

#28 anilthanki closed 10 months ago
0
SLURM bug fix

#27 anilthanki closed 10 months ago
0
restructured slurm scripts

#26 anilthanki closed 10 months ago
0
SLURM readme

#25 anilthanki closed 10 months ago
0
Return a resource usage summary in `atlas-slurm`

#24 anilthanki opened 10 months ago
0
Fir error - unbound variable

#23 pmb59 closed 11 months ago
1
Adds SLURM support to atlas-bash-util

#22 anilthanki closed 10 months ago
4
peach API fixes

#21 pmb59 closed 1 year ago
0
Update VERSION file

#20 pmb59 closed 1 year ago
0
Allow other conda env paths to be activated

#19 irisdianauy closed 1 year ago
0
LSF to SLURM

#18 pmb59 closed 10 months ago
1
bump VERSION to 0.1.3

#17 pmb59 closed 2 years ago
0
Some fixes to allow code refactoring in reprocessing pipeline

#16 pmb59 closed 2 years ago
2
Move get_organism_from_condensed_sdrf() to generic_routines

#15 pmb59 closed 2 years ago
0
Detect exit code better, reorganise code

#14 pinin4fjords closed 2 years ago
1
Fix exit code for LSF

#13 pinin4fjords closed 2 years ago
1
Pass exit codes better, return STDOUT, add quiet

#12 pinin4fjords closed 2 years ago
2
correct usage for atlas-lsf

#11 pmb59 closed 2 years ago
0
Feature/lsf conda env option

#10 irisdianauy closed 2 years ago
4
Add option to specify conda env for LSF job

#9 pcm32 opened 2 years ago
1
Add a sleep before kill

#8 pinin4fjords closed 2 years ago
0
Sleep briefly before cleaning up logs

#7 pinin4fjords closed 2 years ago
0
Fix log diretory creation

#6 pinin4fjords closed 2 years ago
1
Allow use of btop to push jobs up queue

#5 pinin4fjords closed 2 years ago
0
Add log cleanup

#4 pinin4fjords closed 2 years ago
0
Add LSF script and accessory funcs

#3 pinin4fjords closed 3 years ago
1
Tidy up, remove hardcoding

#2 pinin4fjords closed 3 years ago
1
Add accessor and README

#1 pinin4fjords closed 3 years ago
1