auto-generator cuts off experiment titles after any comma

ebi-gene-expression-group / atlas-release-notes

Release notes for (Single Cell) Expression Atlas

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auto-generator cuts off experiment titles after any comma #37

Open pcm32 opened 2 years ago

pcm32 commented 2 years ago

Reported by @anjaf who can maybe point to some examples. Maybe an issue in the jq filtering calls?

anjaf commented 2 years ago

Yes, looks like it. There is some csv handling going on. https://github.com/ebi-gene-expression-group/atlas-release-notes/blob/f7889827c5fd46470ec553810e4ca5c7d61a4754/sc_helper/bin/start_new_release_notes.sh#L74-L75

An example title is E-MTAB-9583 "Single-cell RNA-seq on enriched cardiac fibroblasts from the healthy, sham or MI hearts of Hif-1a conditional knockout or heterozygous mice"