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ebi-gene-expression-group / atlas-web-single-cell

Single Cell Expression Atlas web application
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In the marker gene heat map the cluster labels are not in the correct sorting order #487

Open ke4 opened 4 hours ago

ke4 commented 4 hours ago

In the Single Cell Expression Atlas the cluster labels are not in the correct sorting order in the marker gene heat map.

Steps to reproduce:

  1. Open the following experiment: https://www-test.ebi.ac.uk/gxa/sc/experiments/E-MTAB-10448/results/cell-plots
  2. Go to the Marker genes tab

Here is the full URL: https://www-test.ebi.ac.uk/gxa/sc/experiments/E-MTAB-10448/results/marker-genes

Expected result: The cluster labels are sorted naturally.

Actual result: The cluster labels are not sorted naturally. Look at the screen shot.

Image

ke4 commented 3 hours ago

Here is a previous ticket that tried to provide a solution on the backend.

Make cell plots k options compatible with unsupervised cluster ids

We need to investigate it.

ke4 commented 3 hours ago

I can also reproduce it in our local env with this experiment:

http://localhost:8080/gxa/sc/experiments/E-GEOD-99058/results/marker-genes