ebi-gene-expression-group / container-galaxy-sc-tertiary

Galaxy container for single cell RNA-Seq tertiary analysis tools
MIT License
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HVG always / never + CI update #321

Closed pcm32 closed 4 months ago

pcm32 commented 4 months ago

Description

This PR allows to bias highly variable gene results for use cases where to want to ensure that certain genes are considered or are not considered highly variable genes (ie. there are cases where you don't want Igg* genes for instance to control the clustering and other processes downstream that depend on HVGs).

I took the chance of updating the CI to the latest Tools IUC, with some minor modifications.

Uses main instead of develop from now on.

Type of change

Checklist

pcm32 commented 4 months ago

Merging this as previously approved by @anilthanki on #319 .