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ebi-pf-team / interproscan

Genome-scale protein function classification
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Alternative FPT sites? #329

Closed spitfiredd closed 1 year ago

spitfiredd commented 1 year ago

Just ran internet speed test and on my end I am showing,

Testing download speed................................................................................
Download: 2387.04 Mbit/s
Testing upload speed......................................................................................................
Upload: 2139.44 Mbit/s

The interproscan download is showing, 11+ hours to download, are there any alternatives to download and install?

I am downloading from,

wget https://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/5.62-94.0/interproscan-5.62-94.0-64-bit.tar.gz
wget https://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/5.62-94.0/interproscan-5.62-94.0-64-bit.tar.gz.md5
spitfiredd commented 1 year ago

Looks like there are alt servers here: ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/5.62-94.0/alt/interproscan-core-5.62-94.0.tar.gz

matthiasblum commented 1 year ago

Hi. You can use Globus to download InterPro and InterProScan files, e.g. https://app.globus.org/file-manager?origin_id=6f70c1b4-b824-11e9-98d7-0a63aa6b37da&origin_path=%2Fgridftp%2Fpub%2Fsoftware%2Funix%2Fiprscan%2F5%2F