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ecell / ecell4

An integrated software environment for multi-algorithm, multi-timescale, multi-spatial-representation simulation of various cellular phenomena
https://ecell4.e-cell.org/
GNU General Public License v3.0
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Jupyter notebook for metabolic profile visualization with Cytoscape #43

Closed kozo2 closed 4 years ago

kozo2 commented 8 years ago

This combination is useful not only for metabolic profile but also for expression profile. The pathway networks to combine the profiles are

kozo2 commented 4 years ago

https://github.com/opencobra/COBRA.papers/blob/master/2019_efmviz/efmviz_rcy3_ecoli.Rmd could be used for this purpose.

kaizu commented 4 years ago

Moved to https://github.com/ecell/ecell4_docs/issues/28