Assessment of Ocean Colour temporal stability for ecological studies

[chiaravol]

Data Type

Satellite ECVs - Ocean

Assessment Category

Consistency Assessment

Dataset Name

satellite-ocean-colour

Question Number

1

Task ID

554f0b24-e154-11ee-8810-5279ad638b32

Zipped Notebook

ocean_color_timeseries.ipynb.zip

Environment

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xcb-util-keysyms=0.4.0=h8ee46fc_1 - xcb-util-renderutil=0.3.9=hd590300_1 - xcb-util-wm=0.4.1=h8ee46fc_1 - xerces-c=3.2.5=hac6953d_0 - xesmf=0.8.2=pyhd8ed1ab_0 - xhistogram=0.3.2=pyhd8ed1ab_0 - xkeyboard-config=2.41=hd590300_0 - xorg-fixesproto=5.0=h7f98852_1002 - xorg-inputproto=2.3.2=h7f98852_1002 - xorg-kbproto=1.0.7=h7f98852_1002 - xorg-libice=1.1.1=hd590300_0 - xorg-libsm=1.2.4=h7391055_0 - xorg-libx11=1.8.7=h8ee46fc_0 - xorg-libxau=1.0.11=hd590300_0 - xorg-libxdmcp=1.1.3=h7f98852_0 - xorg-libxext=1.3.4=h0b41bf4_2 - xorg-libxfixes=5.0.3=h7f98852_1004 - xorg-libxi=1.7.10=h7f98852_0 - xorg-libxrender=0.9.11=hd590300_0 - xorg-renderproto=0.11.1=h7f98852_1002 - xorg-xextproto=7.3.0=h0b41bf4_1003 - xorg-xf86vidmodeproto=2.3.1=h7f98852_1002 - xorg-xproto=7.0.31=h7f98852_1007 - xskillscore=0.0.24=pyhd8ed1ab_0 - xyzservices=2023.10.1=pyhd8ed1ab_0 - xz=5.2.6=h166bdaf_0 - yaml=0.2.5=h7f98852_2 - yarl=1.9.4=py311h459d7ec_0 - zarr=2.16.1=pyhd8ed1ab_0 - zeromq=4.3.5=h59595ed_0 - zict=3.0.0=pyhd8ed1ab_0 - zipp=3.17.0=pyhd8ed1ab_0 - zlib=1.2.13=hd590300_5 - zstd=1.5.5=hfc55251_0 - pip: - c3s-eqc-automatic-quality-control==0.1.2.dev103+gaf19fc1 - cacholote==0.7.2 - cads-toolbox==0.0.2b0 - cgul==0.0.4 - coucal==0.0.1b3 - emohawk==0.0.4b0 - kaleido==0.2.1 - pymannkendall==1.4.3 prefix: /data/common/miniforge3/envs/wp5 ```

Anything else we need to know?

No response

[malmans2]

Here is the permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/2340920bbd0d169003f4015f456a0acf02467784/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

Please make sure that the notebook name is correct.

If you need to make modifications, please share here the new version of the notebook and I will provide a new permalink. Let me know when the notebook is accepted, I will merge the PR into main.

[malmans2]

@chiaravol,

Did you delete your comment? Do you need a new permalink?

[chiaravol]

Hi Mattia,

I've just realized there was a small typo in the NB. Could you please provide a new permalink? Here the new zipped NB:

ocean_color_timeseries.ipynb.zip

Thanks

[malmans2]

Here it is: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/c68aa33fa20352ee1b216184e7bd19303a2423d9/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

(This is not the place to provide technical support, but I noticed you changed code in the cached functions. If you do that without invalidating the cache, the change does not affect the results. Are you aware of it? In case you need support, please open an issue here)

[chiaravol]

Hi Mattia. Thanks for the NB! I re-run it and here the new zip file for the permalink: ocean_color_timeseries.ipynb.zip

Cheers, Chiara

[malmans2]

Here it is: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/cb712777ccc7bac19715a7b3840c15455a771b23/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

[chiaravol]

Hi Mattia, here the new NB: ocean_color_timeseries.ipynb.zip

Thanks

[malmans2]

Here is the new permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/1fdb12b4cf91cc42da97fbf85bb8930c5cca652d/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

[chiaravol]

Thanks Mattia

[chiaravol]

Hi Mattia, I need a new permalink for this notebook:

ocean_color_timeseries-Guided.ipynb.zip

Cheers

[malmans2]

Here it is: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/ff59717e920988c324c7950aa738cd98b43a631a/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

[chiaravol]

Hi Mattia, Could you please provide a new permalink satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb.zip

[malmans2]

Here it is: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/78a281f815faa1dbeec5d681fb31c29a97bbd043/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

[chiaravol]

Hi Mattia, Could you please give me another permalink for the NB satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb.zip Thanks

[malmans2]

Here it is: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/b64b3ea2bf277e38dbc9ab321c10aa6488b5fb40/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

[chiaravol]

Hi Mattia, I slightly modified the text in the NB and I need a new permalink for it. satellite_satellite-ocean-colour_consistency-assessment_q01-Copy1.ipynb.zip

Cheers

[malmans2]

Hi @chiaravol,

I added some check so we can catch formatting issues before we go to production. You have a small issue in the last markdown:

WARNING: Non-consecutive header level increase; H2 to H4 [myst.header]

The fix is easy, Key resources and Reference should be one level below If you want to know more. So either do this:

- ## If you want to know more
+ ### If you want to know more

#### References

#### References

Or this:

## If you want to know more

- #### Key resources
+ ### Key resources

- #### References
+ ### References

Hope it's clear! Could you please fix it and send me a new version? Thanks!

[chiaravol]

There you go: satellite_satellite-ocean-colour_consistency-assessment_q01-Copy1.ipynb.zip

Thanks for pointing this out. Chiara

[malmans2]

Here is the permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/ea4b1fae960996e897b9e6348f8d70fdaee0040e/Satellite_ECVs/Ocean_ECVs/satellite_satellite-ocean-colour_consistency-assessment_q01.ipynb

[chiaravol]

Thanks Mattia!