ecmwf-projects / c3s2-eqc-quality-assessment

https://ecmwf-projects.github.io/c3s2-eqc-quality-assessment/
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Consistency Assessment of Satellite Sea Surface Temperature for Climate Monitoring #197

Open vincenzodetoma opened 1 month ago

vincenzodetoma commented 1 month ago

Data Type

Satellite ECVs - Ocean

Assessment Category

consistency

Dataset Name

satellite-sea-surface-temperature

Question Number

01

Workflow ID

eqctier3-8d67bc13-71c2-4aa1-b1bb-e7805302e724

Zipped Notebook

satellite_esacci_gmpe_monitor_q1_new.zip

Environment

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sphinxcontrib-bibtex=2.6.3=pyhd8ed1ab_0 - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_0 - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_0 - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_0 - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_0 - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_0 - sqlalchemy=2.0.35=py311h9ecbd09_0 - sqlite=3.46.1=h9eae976_0 - stack_data=0.6.2=pyhd8ed1ab_0 - statsmodels=0.14.3=py311h9f3472d_1 - structlog=24.4.0=pyhd8ed1ab_0 - tabulate=0.9.0=pyhd8ed1ab_1 - tblib=3.0.0=pyhd8ed1ab_0 - tenacity=9.0.0=pyhd8ed1ab_0 - terminado=0.18.1=pyh0d859eb_0 - threadpoolctl=3.5.0=pyhc1e730c_0 - tiledb=2.26.1=h4c922dd_1 - tinycss2=1.3.0=pyhd8ed1ab_0 - tk=8.6.13=noxft_h4845f30_101 - toml=0.10.2=pyhd8ed1ab_0 - tomli=2.0.1=pyhd8ed1ab_0 - toolz=0.12.1=pyhd8ed1ab_0 - tornado=6.4.1=py311h9ecbd09_1 - tqdm=4.66.5=pyhd8ed1ab_0 - traitlets=5.14.3=pyhd8ed1ab_0 - typer=0.12.5=pyhd8ed1ab_0 - typer-slim=0.12.5=pyhd8ed1ab_0 - typer-slim-standard=0.12.5=hd8ed1ab_0 - types-python-dateutil=2.9.0.20240906=pyhd8ed1ab_0 - typing-extensions=4.12.2=hd8ed1ab_0 - typing_extensions=4.12.2=pyha770c72_0 - typing_utils=0.1.0=pyhd8ed1ab_0 - tzcode=2024b=hb9d3cd8_0 - tzdata=2024a=h8827d51_1 - uc-micro-py=1.0.3=pyhd8ed1ab_0 - udunits2=2.2.28=h40f5838_3 - uri-template=1.3.0=pyhd8ed1ab_0 - uriparser=0.9.8=hac33072_0 - urllib3=2.2.3=pyhd8ed1ab_0 - wayland=1.23.1=h3e06ad9_0 - wcwidth=0.2.13=pyhd8ed1ab_0 - webcolors=24.8.0=pyhd8ed1ab_0 - webencodings=0.5.1=pyhd8ed1ab_2 - websocket-client=1.8.0=pyhd8ed1ab_0 - wheel=0.44.0=pyhd8ed1ab_0 - xarray=2024.9.0=pyhd8ed1ab_0 - xarraymannkendall=1.4.5=pyhd8ed1ab_0 - xcb-util=0.4.1=hb711507_2 - xcb-util-cursor=0.1.5=hb9d3cd8_0 - xcb-util-image=0.4.0=hb711507_2 - xcb-util-keysyms=0.4.1=hb711507_0 - xcb-util-renderutil=0.3.10=hb711507_0 - xcb-util-wm=0.4.2=hb711507_0 - xerces-c=3.2.5=h666cd97_1 - xesmf=0.8.7=pyhd8ed1ab_0 - xhistogram=0.3.2=pyhd8ed1ab_0 - xkeyboard-config=2.42=h4ab18f5_0 - xorg-fixesproto=5.0=hb9d3cd8_1003 - xorg-inputproto=2.3.2=hb9d3cd8_1003 - xorg-kbproto=1.0.7=hb9d3cd8_1003 - xorg-libice=1.1.1=hd590300_0 - xorg-libsm=1.2.4=h7391055_0 - xorg-libx11=1.8.9=hb711507_1 - xorg-libxau=1.0.11=hb9d3cd8_1 - xorg-libxdmcp=1.1.3=hb9d3cd8_1 - xorg-libxext=1.3.4=h0b41bf4_2 - xorg-libxfixes=5.0.3=h7f98852_1004 - xorg-libxi=1.7.10=h4bc722e_1 - xorg-libxrender=0.9.11=hd590300_0 - xorg-libxtst=1.2.5=h4bc722e_0 - xorg-libxxf86vm=1.1.5=hb9d3cd8_2 - xorg-recordproto=1.14.2=hb9d3cd8_1003 - xorg-renderproto=0.11.1=hb9d3cd8_1003 - xorg-xextproto=7.3.0=hb9d3cd8_1004 - xorg-xproto=7.0.31=hb9d3cd8_1008 - xskillscore=0.0.26=pyhd8ed1ab_0 - xyzservices=2024.9.0=pyhd8ed1ab_0 - xz=5.2.6=h166bdaf_0 - yaml=0.2.5=h7f98852_2 - yarl=1.12.1=py311h9ecbd09_0 - zarr=2.18.3=pyhd8ed1ab_0 - zeromq=4.3.5=ha4adb4c_5 - zict=3.0.0=pyhd8ed1ab_0 - zipp=3.20.2=pyhd8ed1ab_0 - zlib=1.3.1=h4ab18f5_1 - zstandard=0.23.0=py311hbc35293_1 - zstd=1.5.6=ha6fb4c9_0 - pip: - alembic==1.13.3 - c3s-eqc-automatic-quality-control==0.1.2.dev113+g12de045 - cacholote==1.4.0 - cgul==0.0.4 - earthkit-geo==0.2.0 - earthkit-meteo==0.1.1 - eccodes==2.38.0 - ecmwflibs==0.6.3 - kaleido==0.2.1 - mako==1.3.5 - pymannkendall==1.4.3 - sqlalchemy-utils==0.41.2 prefix: /data/common/miniforge3/envs/wp5 ```

Anything else we need to know?

Hi @malmans2, we (myself and @dcianicnr83) updated the notebook in #66 to match the new assessment categories and notebook template. Can you please provide us with a permalink and preview? Thanks

malmans2 commented 1 month ago

I assume I can close #66?

malmans2 commented 1 month ago

Also, I think something is not right. Why is the workflow ID of this notebook the same as #199? I thought each notebook was supposed to be in separate workflows now.

vincenzodetoma commented 1 month ago

Also, I think something is not right. Why is the workflow ID of this notebook the same as #199? I thought each notebook was supposed to be in separate workflows now.

I copy pasted the workflows from the old issue, where the workflow was unique. We are not able to see the tasks because they went to the data provider after the splitting. Shall we re-open issues? In case yes, you can close all our SST issues, and we'll reopen them with the correct workflow id. Sorry for this oversight! @dcianicnr83 Do you see something in the CIM?

malmans2 commented 1 month ago

Sorry, I'm a little lost. Do you have access to the unique workflow ID for each notebook? We can not open PR with multiple notebooks anymore.

If you have it, you can just edit the workflow ID you provided in the form. Let me know when you are done, I don't get notifications for edits.

malmans2 commented 1 month ago

Hi @vincenzodetoma,

How would you like to proceed? Are you able to get the correct workflow ID from the CIM?

vincenzodetoma commented 1 month ago

Hi @malmans2, unfortunately still not. @dcianicnr83 asked for the reopening of all his tasks, but there were no answers yet. We'll come back to you as soon as we'll have something to work on. Thanks for your patience!

malmans2 commented 1 month ago

OK, if you need to speed up the process we can use the old ones and we'll fix it at the next round of review.

vincenzodetoma commented 1 month ago

Hi @malmans2, @dcianicnr83 we have modified the workflow id editing the issue opening form above. Thanks!

malmans2 commented 1 month ago

I had to make a couple of fixes: You can only use H1 for the title, and one of the reference was not formatted correctly. See: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/pull/207/commits/dd31f4cf090ad1642ee9f8d6285b3ffdddd475db

I will share the permalink in a minute.

malmans2 commented 1 month ago

Permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/8cc62b1a645d47f5f48da78e33607299ee436386/Satellite_ECVs/Ocean/satellite_satellite-sea-surface-temperature_consistency_q01.ipynb

Please ensure that the notebook name is correct. If you need to make any modifications (e.g., addressing the reviewer's comments), please share the new version of the notebook here, and I will provide a new permalink. Let me know once the notebook is accepted, and I will merge the PR into the main branch.

PREVIEW

malmans2 commented 1 month ago

All set. All notebooks had the same issues. Please start from the latest permalink if you are going to have another round of review.

vincenzodetoma commented 1 week ago

Dear @malmans2, with @dcianicnr83 we modified the notebook according to reviewer's suggestions. We ask thus for a new permalink. Thanks for your help and support! We also kindly ask you to close #198 #200, as agreed with @chunxueyang after internal discussion. Thanks! satellite_esacci_gmpe_monitor_q1_new.ipynb.zip

malmans2 commented 1 week ago

I found two issues in the notebook:

I fixed both of them, please start from the correct version if you'll need to revise the notebook.

New permalink: https://github.com/ecmwf-projects/c3s2-eqc-quality-assessment/blob/efde15aea02c631b0f2aefa975eed2fcef66c500/Satellite_ECVs/Ocean/satellite_satellite-sea-surface-temperature_consistency_q01.ipynb

PREVIEW