DJDavies2
commented
3 months ago I think this ectrans branch fixes the issue:
https://github.com/DJDavies2/ectrans/tree/bugfix/95
There is only one change, removing a CONTIGUOUS attribute from a variable. However I don't know whether this change would be accepted in ectrans.
What happened?
Ctest atlas_test_trans fails like so:
Read rspecg read_rspecg ... read_rspecg ... done
[1] ========================================= [1] Segmentation fault (signal intercepted by atlas) [1] ----------------------------------------- [1] BACKTRACE [1] ----------------------------------------- [1] backtrace [1] stack has 15 addresses [1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_basespice_gnu/lib/libeckit.so+eckit::BackTrace::dump[abi:cxx11]())0x172 [1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/libatlas.so.0.37+atlas::backtrace[abi:cxx11]())0xa [1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_basespice_gnu/lib/libatlas.so.0.37+atlas::library::atlas_signal_handler(int, siginfo_t, void))0x213 [1] (/usr/lib64/libpthread.so.0+)0xf630 [1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_basespice_gnu/lib/../lib64/libectrans_dp.so+dist_specdp)0x1f4c [1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_base__spice_gnu/lib/libtransi_dp.so+trans_distspec)0x4b3 [1] (/home/h01/frwd/cylc-run/mo-bundle-build-stack-latest-all/share/make_mo_basespice_gnu/lib/libatlas.so.0.37+atlas::trans::TransIFS::distspec(int, int const, double const, double*) const)0x73
What are the steps to reproduce the bug?
I am compiling against head of develop for ectrans, fiat, eckit and fckit and using gnu compiler.
Version
develop
Platform (OS and architecture)
Linux
Relevant log output
No response
Accompanying data
No response
Organisation
No response