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ecr05 / MSM_HOCR

Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
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fatal error: newmatap.h: No such file or directory #14

Closed ShacharGal closed 3 years ago

ShacharGal commented 4 years ago

while trying to compile MSM_HOCR on ubuntu 18.04 we encountered this error:

root@maestro:/MSM_HOCR/src/DiscreteOpt# make c++ -Wall -ansi -pedantic -g -DNDEBUG -std=c++11 -DHAS_HOCR -DNDEBUG -O3 -fexpensive-optimizations -I/usr/local/fsl/extras/include/boost -I/usr/local/fsl/extras/include/newmat -I/usr/local/fsl/extras/include/newran -I/usr/local/fsl/extras/include -I/usr/local/fsl/extras/include/libcprob -I/usr/local/fsl/extras/include/libprob -I/usr/local/fsl/extras/include/boost -I/usr/local/fsl/MSM_HOCR/include -I/usr/local/fsl/MSM_HOCR/extras/include -I. -I/usr/local/fsl/MSM_HOCR/include -I/usr/local/fsl/include -c -o DiscreteCostFunction.o DiscreteCostFunction.cpp In file included from /usr/local/fsl/include/newmesh/resampler.h:104:0, from /usr/local/fsl/include/newmesh/meshfns.h:72, from /usr/local/fsl/include/newmesh/featurespace.h:77, from similarities.h:17, from DiscreteCostFunction.h:9, from DiscreteCostFunction.cpp:8: /usr/local/fsl/include/utils/log.h:85:10: fatal error: newmatap.h: No such file or directory

include "newmatap.h"

      ^~~~~~~~~~~~

compilation terminated.

: recipe for target 'DiscreteCostFunction.o' failed make: *** [DiscreteCostFunction.o] Error 1 root@maestro:/MSM_HOCR/src/DiscreteOpt# any ideas on how to complete this compilation? or alternative solutions for getting the updated msm binary for usage with MSMAll? thanks
ecr05 commented 3 years ago

This is probably a FSL v5 versus v6 issue? These files are not present in FSLv6 but the new master should work