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edamontology / edam-bioimaging

Ontology of bioimage informatics operations, topics, types of data, and data formats. EDAM-Bioimaging is an extension of the EDAM ontology (edamontology.org) dedicated to bioimaging data analysis, and developed in an open collaboration including partners from NEUBIAS (neubias.org), COMULIS (comulis.eu), and ELIXIR (elixir-europe.org)..
https://webprotege.stanford.edu/#projects/2ce704bf-83ed-4d2e-985f-84c4841fac71/edit/Classes
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Update NCBO BioPortal links to include ?p=classes #27

Closed matuskalas closed 3 years ago

matuskalas commented 3 years ago

I think it'll be great to update most of the links to browsing EDAM in the NCBO BioPortal from https://bioportal.bioontology.org/ontologies/EDAM-BIOIMAGING to https://bioportal.bioontology.org/ontologies/EDAM-BIOIMAGING?p=classes. In most of the places, it makes sense to point to browsing (i.e. the "Classes" tab, ?p=classes), instead of the default "Summary" tab.

Way forward: Search for all links to https://bioportal.bioontology.org, and update everywhere where it'll be better with the "Classes" tab.

(A good short mini-task for newcomers! 😉 incl. Outreachy applicants)

Lukong123 commented 3 years ago

Hello @matuskalas i will like to work on this

Lukong123 commented 3 years ago

Please I am a little bit confuse can you throw more light to it, where do we search all the links?

matuskalas commented 3 years ago

Please I am a little bit confuse can you throw more light to it, where do we search all the links?

Sure! Please search for e.g. bioportal.bioontology.org in the GitHub search box up left (the default option 'In this repository'). I can see that all the hits are as they should be, so nothing more to improve here in this repo, sorry😅 Please do the same check in edamontology/edamontology#665 and/or edamontology/edamontology.org#10, thanks!🙏🏽