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edawson / gfakluge

A C++ library and utilities for manipulating the Graphical Fragment Assembly format.
http://edawson.github.io/gfakluge/
MIT License
51 stars 20 forks source link

GFA extended to include JSON tags #5

Closed edawson closed 8 years ago

edawson commented 8 years ago

The GFA spec now includes a J tag in the optional fields that can contain JSON. There is also talk of a PG (PanGenome) tag. These need to be incorporated into the spec with care, as JSON will contain colons (which are the current delimiter for optional fields).

edawson commented 8 years ago

This is resolved by https://github.com/edawson/gfakluge/commit/605939d279fc55a2a84d31484b976ca40282f2c5