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edickie / ciftify

The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
https://edickie.github.io/ciftify/
MIT License
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ciftify_statclust_report can't run with options served #115

Closed YaoMeng94 closed 5 years ago

YaoMeng94 commented 5 years ago

Dear Erin, I run the ciftify_statclust_report with some options but the context it gives to me is "Usage: ciftify_statclust_report [options] ", which my input is " ciftify_statclust_report --min-threshold --max-threshold --left-surface --right-surface --left-surface-area --right-surface-area --outputbase <my map file(.dscalar.nii)>" ( denote the specific context put into). The command can run with no options served, but my situation must specify the surface and area options, could you look at it, deeply thanks!

YaoMeng94 commented 5 years ago

oops, the input of my command is wrong, sorry

edickie commented 5 years ago

Thanks for letting me know! What was the mistake? I'll make an issue to add a more useful error message in the future.

On Tue, Jun 18, 2019 at 4:49 AM DearBraveJohn notifications@github.com wrote:

oops, the input of my command is wrong, sorry

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YaoMeng94 commented 5 years ago

The mistake is made by myself 😂 I simply rerun the command without serving the '--outputbase' option which contains path previously, it worked.

YaoMeng94 commented 5 years ago

Sorry to bother, by the way I think you should update ciftify documentation page's reference part https://edickie.github.io/ciftify/#/07_references with putting your ciftify NeuroImage article on top, so let people citing this useful tool easily, it really helps my work a lot, thanks!