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edickie / ciftify

The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
https://edickie.github.io/ciftify/
MIT License
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The cvs input for PINT #138

Open renxili opened 4 years ago

renxili commented 4 years ago

Hi:

For the input spreadsheet to PINT, how do we suppose to find the vertex id corresponding to the given MNI coordinates?

Best, Renxi

edickie commented 4 years ago

The only csv that has ever been tested with PINT is the one at the link below.

https://github.com/edickie/ciftify/blob/master/ciftify/data/PINT/Yeo7_2011_80verts.csv

The algorithm reads from the "vertex" column and the "network" columns because PINT works on the cortical surface. The x, y, z coordinates were only used for figures in the final paper but they are ignored by PINT.