Error in ciftify_subject_fmri with --func-ref option

[NeuroImagingWorld]

File "${CODEPATH}/ciftify/bin/ciftify_subject_fmri.py", line 522, in define_func_3D cifify.meants.verify_nifti_dimensions_match(settings.ref_vol.path, NameError: name 'cifify' is not defined

After correcting the typo, running into below issue

ciftify.meants.verify_nifti_dimensions_match(settings.ref_vol.path, AttributeError: 'Settings' object has no attribute 'ref_vol'

Here is the command that is used

ciftify_subject_fmri --surf-reg FS --ciftify-work-dir ${PROCESSDIR} --FLIRT-to-T1w --func-ref ${DATAPATH}/fmri_map1.nii.gz fmri_mapAll.nii.gz SUBJECT mapname

Please assist if you see any issue in the usage

Thanks

[edickie]

Looks like a bug on my end.. will debug ASAP

On Sun, Jun 17, 2018 at 1:42 PM, NeuroImagingWorld <notifications@github.com

wrote:

File "${CODEPATH}/ciftify/bin/ciftify_subject_fmri.py", line 522, in define_func_3D cifify.meants.verify_nifti_dimensions_match(settings.ref_vol.path, NameError: name 'cifify' is not defined

After correcting the typo, running into below issue

ciftify.meants.verify_nifti_dimensions_match(settings.ref_vol.path, AttributeError: 'Settings' object has no attribute 'ref_vol'

Here is the command that is used

ciftify_subject_fmri --surf-reg FS --ciftify-work-dir ${PROCESSDIR} --FLIRT-to-T1w --func-ref ${DATAPATH}/fmri_map1.nii.gz fmri_mapAll.nii.gz SUBJECT mapname

Please assist if you see any issue in the usage

Thanks

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[edickie]

Bug fixed. It should be fine with version 2.0.3