The test_utils.py (formerly test_utilities.py) test cases now work. The one modified test case inside test_ciftify_recon_all DOES NOT work, but the patch is now correct. That test is failing now because of the MSM feature you added contains a bug (or two)! If msm is not found config.find_msm() tries to call .replace on 'None'. Also config.verify_msm_available() tries to call sys.exit() but config.py hasn't imported sys.
The test_utils.py (formerly test_utilities.py) test cases now work. The one modified test case inside test_ciftify_recon_all DOES NOT work, but the patch is now correct. That test is failing now because of the MSM feature you added contains a bug (or two)! If msm is not found
config.find_msm()tries to call .replace on 'None'. Alsoconfig.verify_msm_available()tries to call sys.exit() but config.py hasn't imported sys.