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edilytics / CRISPResso2

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
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Add `all_deletion_coordinates` to be returned by `find_indels_substitutions_legacy` function #106

Closed Colelyman closed 1 month ago

Colelyman commented 1 month ago

This PR adds the all_deletion_coordinates list to be returned by the find_indels_substitutions_legacy function. Without this, when one would use the --use_legacy_insertion_quantification parameter a KeyError would be thrown.

This also updates the unit tests to catch this error.