I have around 300 phage genomes. and i wish to check the spacers in these many genomes. what should be the command line to execute the analysis.

edzuf / CrisprOpenDB

16 stars 8 forks source link

Open Thewhitewolf8 opened 11 months ago

Thewhitewolf8 commented 11 months ago

I have around 300 phage genomes. and I wish to check the spacers in these many genomes. what should be the command line to execute the analysis.

python CL_Interface.py -i TestGenomes/KJ489400.fasta (This is for individual genome)

Please let me know.

plpla commented 11 months ago

Hello @Thewhitewolf8, the command to predict the host of multiple phages should be identical. Let me know how it goes!