include all GO and KEGG information to annotation output of eggnog mapper.

eggnogdb / eggnog-mapper

Fast genome-wide functional annotation through orthology assignment

http://eggnog-mapper.embl.de

GNU Affero General Public License v3.0

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include all GO and KEGG information to annotation output of eggnog mapper. #325

Open mdayii opened 3 years ago

mdayii commented 3 years ago

I would like to ask whether any option in command line of emapper.py to get a full result of GO and KEGG assignment. For example, in the annotation output there is only term such as GO:0097159 but no information about biological process, cellular component or molecular binding such as "organic cyclic compound binding" and only ko:K02863 id of KEGG assignment.

is there any option or a way to get a full result of GO and KEGG assignment?

best regards.

Cantalapiedra commented 3 years ago

Hi,

currently we do not provide those descriptions. You may need to link those IDs to the GO/KEGG databases to obtain them.

Best, Carlos