Closed egouldo closed 1 week ago
It just occurred to me why exclude_extreme_VZ()
isn't behaving as intended for the Euc analyses... now they're on the response scale (raw counts), whereas before they were Z-transformed. So using the default threshold of 3
on estimates on the count scale isn't going to do much at all, hence why we've got extreme values getting through now!
relevant line from logged analysis in manuscript is:
mutate(exclusion_threshold = param_mean + 3*param_sd) %>%
i.e.:so values are removed prior to logging