egouldo / ManyEcoEvo

Software for analysing Many-Analysts' style data and generating the ManyEcoEvo project data
https://egouldo.github.io/ManyEcoEvo/
GNU General Public License v3.0
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low priority Plot of residuals vs fitted values for each model #68

Open hannahsfraser opened 1 year ago

hannahsfraser commented 1 year ago

Plot of residuals vs fitted values for each model

egouldo commented 1 year ago

From Zuur (2017):

“Violation of these assumptions may result in biased parameter estimates and type I errors (Quinn & Keough 2002). To validate the fitted models, standardized or Pearson residuals must be plotted against fitted values, against each covariate in the model, against each covariate not in the model and against time and space coordinates, if relevant (Zuur et al. 2009). If the data include temporal or spatial aspects, use autocorrelation functions and/or variograms to assess independence of residuals (Schabenberger &Pierce2002).” (Zuur and Ieno, 2016, p. 640) (pdf)

“The Methods section can include ‘Model assumptions were verified by plotting residuals versus fitted values, versus each covariate in the model and versus each covariate not in the model. We assessed the residuals for temporal and spatial dependency’. In the Results section, state ‘Model validation indicated no problems’, assuming that this was the case. It may be an option to include one or two graphs in an online Supporting information. Be prep” (Zuur and Ieno, 2016, p. 640) (pdf)