Define metadata schema for variant and clinical information sources

mroos commented 9 months ago

[ ] #38

mroos commented 9 months ago

Use case implementation of FAIR Data Train Planning issue #2 'Identify (meta)data schemas from use cases)'

mroos commented 2 months ago

10/6 update No update, we leave it on to make sure we link the Phenopackets model denoting the data model for the data is linked into the data model appropriately. Nuria developed connection with phenopackets, used 'qualified relation' (or something like that in DCAT), based on suggestion by Mark W.

[ ] @NuriaQueralt will add the link to her work.
[ ] @mroos to create specific issue on the generalised issue (standard way to connect to model/shape denoting the data model/shape; tag @ericprud, @luizbonino @markwilkinson to agree on the EJP RD proposal for this (will go into final deliverable) and link it into this issue.

mroos commented 1 month ago

Mark et al experimenting with reference implementation. A workflow did not work. Practice now: github full of shacls.

[ ] @NuriaQueralt and @mroos to address the checklist above in the next coworking slot
[ ] @mroos to create section in Deliverable for a paragraph about this (how it should work in VP labs)
[ ] @markwilkinson will then write a draft of that section

ejp-rd-vp / DistributedAnalysis

Define metadata schema for variant and clinical information sources #14