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ekg / hhga

haplotypes genotypes and alleles example decision synthesizer
MIT License
20 stars 3 forks source link

changes to format #19

Closed ekg closed 8 years ago

ekg commented 8 years ago

For each alignment, record which alleles it matches. Do this in another namespace (|match ?).

Sort the alignments by 1) the number of bases in the window, 2) their original position in the input.

ekg commented 8 years ago

For the new namespace, add features with weights for the rate of match with the alleles in reference and haps..