ekg / seqwish

alignment to variation graph inducer
MIT License
143 stars 18 forks source link

"OM" not valid cigar #10

Open apregier opened 5 years ago

apregier commented 5 years ago

Just noticing that sometimes "OM" is printed in link lines of GFA, which is not valid cigar causing problem with tools reading the GFA - we have a workaround for now but next time you are fixing stuff it could be changed. Should be "0M" maybe?