If seqwish gets killed at the right moment, it will leave some temporary files behind that it doesn't clean up on its next invocation. That can be a problem. The solution might be to patch mmmultimap to do the right thing in this case, and delete any files that exist before re-opening them and corrupting the table that's being recorded.
If seqwish gets killed at the right moment, it will leave some temporary files behind that it doesn't clean up on its next invocation. That can be a problem. The solution might be to patch mmmultimap to do the right thing in this case, and delete any files that exist before re-opening them and corrupting the table that's being recorded.