Closed ekg closed 4 years ago
This behaves like -r 1, but only if the sequences that are being collapsed into the same node are within a given distance.
In effect, setting this to a low number will prevent small self-loops, but allow larger looping copy number variants.
This behaves like -r 1, but only if the sequences that are being collapsed into the same node are within a given distance.
In effect, setting this to a low number will prevent small self-loops, but allow larger looping copy number variants.