ekg / seqwish

alignment to variation graph inducer
MIT License
143 stars 18 forks source link

distrust cigar mismatch characters #77

Closed ekg closed 3 years ago

ekg commented 3 years ago

This treats X and = like M. We check the input sequences.

A bug in a particular mapper tends to cause this (wfmash), so this is just for testing until that's resolved.

ekg commented 3 years ago

Merging as this is always safer.