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ekimb / mapquik

Efficient low-divergence mapping of long reads in minimizer space
MIT License
63 stars 4 forks source link

SAM output #18

Open Wenfei-Xian opened 10 months ago

Wenfei-Xian commented 10 months ago

Hey,

    Many thanks for the development of this awesomw tool !
    I am curious, is it possible to output the sam file or CIGAR value ?

Best, Wenfei

rchikhi commented 10 months ago

not yet, but it's a planned feature!