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eladnoor / component-contribution

Standard reaction Gibbs energy estimation for biochemical reactions
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New compounds with fake KEGG ids won't get cached #17

Closed serdar- closed 5 years ago

serdar- commented 6 years ago

When I add new components to kegg_additions.tsv and rerun the compound_cacher.py, I cannot obtain the compound information with the KEGG id. I think compound_casher.py does not read the entries for new components. Could you suggest a workaround for this problem? Many thanks in advance!

eladnoor commented 6 years ago

It seems that the issue is specific to Jupyter notebooks, but was not reproduced in standard python scripts.