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elifesciences / elife-crossref-xml-generation

Crossref deposit of journal articles
MIT License
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Content in multi-part abstracts is ignored #69

Closed gorbynet closed 3 years ago

gorbynet commented 5 years ago

Content included in abstracts under <sec> tags is ignored. An example abstract for testing would be:

<abstract abstract-type="structured" id="abstr1" xml:lang="en">
<sec>
<title content-type="abstract-subheading">Purpose</title>
<p>This study aims to show a case study of ecosystem-based adaptation (EbA) measures to increase coastal system&#x2019;s resilience to extreme weather events and sea-level rise (SLR) implemented at Kiy&#x00FA; (Uruguayan coast of the Rio de la Plata river estuary).</p>
</sec>
<sec>
<title content-type="abstract-subheading">Design/methodology/approach</title>
<p>A participatory process involving the community and institutional stakeholders was carried out to select and prioritise adaptation measures to reduce the erosion of sandy beaches, dunes and bluffs due to extreme wind storm surge and rainfall, SLR and mismanagement practices. The recovery of coastal ecosystems was implemented through soft measures (green infrastructure) such as revegetation with native species, dune regeneration, sustainable drainage systems and the reduction of use pressures.</p>
</sec>
<sec>
<title content-type="abstract-subheading">Findings</title>
<p>Main achievements of this case study include capacity building of municipal staff and stakeholders, knowledge exchanges with national-level decision makers and scientists and the incorporation of EbA approaches by subnational-level coastal governments. To consolidate EbA, the local government introduced innovations in the coastal management institutional structure.</p>
</sec>
<sec>
<title content-type="abstract-subheading">Originality/value</title>
<p>The outcomes of the article include, besides the increase in the resilience of social-ecological systems, the strengthening of socio-institutional behaviour, structure and sustainability. This experience provides insights for developing a strategy for both Integrated Coastal Management and climate adaptation at the national scale.</p>
</sec>
</abstract>
gnott commented 5 years ago

Thanks for the sample. We do not have much support yet for structured abstracts, in a related issue to the parsing and generation tools we have so far is shown in the PubMed deposits https://github.com/elifesciences/elife-pubmed-feed/issues/67.

I'd like to CC in @Melissa37, and maybe we can review structured abstracts again this year.

gnott commented 4 years ago

PR https://github.com/elifesciences/elife-crossref-xml-generation/pull/89 will be enhancing the ability of depositing structured abstracts. I see in your sample the <title> tag has some attributes which my current test scenarios do not yet include, and I'll update them to be sure the sample you provided will be compatible.