Open nlisgo opened 10 months ago
Affiliations for Shunping He are wrong and email address seems erroneously included. QC otherwise ok.
Not sure what's going on here. @JGilbert-eLife could I ask that you take a look at the package please? Thanks
This is one where Exeter took information from the author's cover page, which is included in the supplementary files for that preprint but not on the article PDF itself.
I thought this was probably OK here because Research Square affiliations are usually truncated compared to author cover pages. Sorry - I should have noted that in the ticket sooner.
Thanks @JGilbert-eLife - sounds good to me, I'm sure this is probably what the authors would prefer (but if not, no doubt we'll hear about it!).
I'm happy to proceed as is on that basis.
[PLACE MANUSCRIPT AND EDITOR DETAILS HERE WHEN AVAILABLE] See step 3
[PLACE PDF URL HERE WHEN AVAILABLE] See step 7
Step 1. Inform bioRxiv
Who can help: @QueenKraken, @nlisgo, @scottaubrey
Step 2. Create preview of manuscript
Who can help: @fred-atherden, @nlisgo, @scottaubrey
Pull request: [PLACE LINK TO PULL REQUEST HERE]
Detailed instructions: https://github.com/elifesciences/enhanced-preprints-data#add-a-manuscript
Step 3: Awaiting public reviews and QC
Who can help: Production team
Who can help: Editorial team
Example
``` "msas": "Genetics and Genomics", "Neuroscience" "msid": "84628" "version": "1" "preprintDoi": "10.1101/2022.10.28.514241" "articleType": "Reviewed Preprint" "status": "Published from the original preprint after peer review and assessment by eLife." "Reviewed Preprint posted": "2023-01-02" "Sent for peer review": "2022-10-28" "Posted to bioRxiv": "2022-11-21" (link: "Go to bioRxiv": "https://www.biorxiv.org/content/10.1101/2022.10.28.514241v1") Editors: Reviewing Editor Michael B Eisen University of California, Berkeley, United States Senior Editor Michael B Eisen University of California, Berkeley, United States ```Step 4: Modify manuscripts.json (no PDF)
Pull request: [PLACE LINK TO PULL REQUEST HERE] #enhanced-preprint comment thread: [PLACE LINK TO COMMENT HERE]
Instructions to modify manuscripts.json
- Visit: https://github.com/elifesciences/enhanced-preprints-client/actions/workflows/publish-manuscript.yaml - Click: Run workflow - Complete the form and click "Run workflow" - A successful run should result in a new pull request at https://github.com/elifesciences/enhanced-preprints-client/pulls - Open the pull request and click the "Ready for review" button to trigger tests - Once the tests pass and you are happy with the changes the PR can be merged Example pull request: https://github.com/elifesciences/enhanced-preprints-client/pull/334/files Once the pull request is merged in it should be available a few minutes later.Request that a doi
Post the following in #enhanced-preprint:
Step 5: Awaiting search reindex
The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.
Additional info
If needed, the jenkins pipeline to reindex search can be triggered sooner. https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/Step 6: Published! Request PDF generation
#enhanced-preprint comment thread: [PLACE LINK TO COMMENT HERE]
Post the following to the #enhanced-preprint on slack:
Step 7: Introduce PDF to data folder and git repo
Detailed instructions: https://github.com/elifesciences/enhanced-preprints-data#add-a-pdf
Step 8: Add PDF url to manuscripts.json
[PLACE LINK TO PULL REQUEST HERE]
Instructions to add PDF url to manuscripts.json
- Visit: https://github.com/elifesciences/enhanced-preprints-client/actions/workflows/add-pdf-url-to-manuscript.yaml - Click: Run workflow - Complete the form and click "Run workflow" - A successful run should result in a new pull request at https://github.com/elifesciences/enhanced-preprints-client/pulls - Open the pull request and click the "Ready for review" button to trigger tests - Once the tests pass and you are happy with the changes the PR can be merged Example pull request: https://github.com/elifesciences/enhanced-preprints-client/pull/397/files Once the pull request is merged in it should be available a few minutes later.Step 9: Done!