MSID: 92748 Version: 1 DOI: 10.1101/2022.03.28.22272122

[nlisgo]

MSID: 92748

Version: 1

Preprint DOI: https://doi.org/10.1101/2022.03.28.22272122

Step 1. Awaiting reviews

Editorial to post reviews via hypothesis

Useful links:

• DocMap: https://data-hub-api.elifesciences.org/enhanced-preprints/docmaps/v2/by-publisher/elife/get-by-manuscript-id?manuscript_id=92748
• New model tracking: https://docs.google.com/spreadsheets/d/1_fHaoOy7hjyocptKtVJRijeNpUY4hBS7Ck_aVmx6ZJk/
• Reviews on sciety: https://sciety.org/articles/activity/10.1101/2022.03.28.22272122

For trouble shooting (e.g. no Docmaps available):

• DocMap issue addressing: https://miro.com/app/board/uXjVNCwK6EI=/
• Explore DataHub DocMaps API: https://lookerstudio.google.com/reporting/4c2f0368-babb-4beb-b5b3-497e7e7b0f08/page/ejphD
• Unmatched submissions and preprints: https://lookerstudio.google.com/u/0/reporting/9f86204f-3bf7-477c-9b18-5c5ef141bf69/page/p_gxi57ha93c
• Unmatched manuscripts spreadsheet: https://docs.google.com/spreadsheets/d/15QcK8w-ssB7109RQEDtFpJPZ0J5HTGxoHa_2TtpMBbg/edit#gid=1336081641

Step 2. Preview reviewed preprint

Production QC content ahead of publication

Instructions:

• QC preview: https://prod--epp.elifesciences.org/previews/92748v1
• Update ticket with any problems (add blocked label)
• When QC OK, add QC OK label to ticket and add publication date and time to https://docs.google.com/spreadsheets/d/1amAlKvdLcaDp5W8Z8g77NmkwbMF5n_u89ArSqPMO8jg
• Move card to next column
• (At end of the day post link in #enhanced-preprint and ask for PDF to be generated)

Useful links:

• Preprint DOI : https://doi.org/10.1101/2022.03.28.22272122
• Confirm reviews returned by EPP: https://prod--epp.elifesciences.org/api/reviewed-preprints/92748/v1/reviews
• To update the MECA path in the docmap: https://docs.google.com/spreadsheets/d/1mctCQuNFBjSn97Lihy7_vBO6z7-N-oqyLv4clyi6zHg

Step 3: Awaiting search reindex

This step adds the reviewed preprint to the homepage: https://elifesciences.org

The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.

Useful links:

• Jenkins pipeline to reindex search can be triggered sooner or monitored here: https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/

Step 4: Published! PDF requested

Waiting for PDF to be generated

Useful links:

• PDF tracking: https://docs.google.com/spreadsheets/d/106_XeDjmuBae7gexOTNzg60lapeqjl2aRn9DzupGyS8/

Step 5: Introduce PDF to data folder and git repo

Upload PDF to relevent folder in git repo https://github.com/elifesciences/enhanced-preprints-data/

Step 6: Done!

• [ ] Kettle is on!

[JGilbert-eLife]

@FionaBryant I think this assessment needs rewording, and if it hasn't been corrected already, the Reviewer 1 heading is broken:

[JGilbert-eLife]

@fred-atherden Supplemental figure 4's title is inconsistent with the authors; should we fix this?

[fred-atherden]

Thanks @JGilbert-eLife. yeah I agree, that entire section looks like trash.

I'm going to move the captions over to the supplementary files in the XML, which will mean they are removed until EPP support the display of supplementary files. HTML should update in the next few hours.

[JGilbert-eLife]

Thanks @fred-atherden! That looks better.

@FionaBryant have you had a chance to look at this one?

[FionaBryant]

Hi James, sorry I am stuck on this one - I can remove 'valuable' but the term 'important' is not used correctly. Would it be ok to check for me to check with Andy on Monday?

On Fri, 5 Apr 2024 at 12:49, JGilbert-eLife @.***> wrote:

Thanks @fred-atherden https://github.com/fred-atherden! That looks better.

@FionaBryant https://github.com/FionaBryant have you had a chance to look at this one?

— Reply to this email directly, view it on GitHub https://github.com/elifesciences/enhanced-preprints-import/issues/3302#issuecomment-2039603894, or unsubscribe https://github.com/notifications/unsubscribe-auth/ARMNBZC2QVLAMHVODEFGNTTY32FWLAVCNFSM6AAAAABFF55HJKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDAMZZGYYDGOBZGQ . You are receiving this because you were mentioned.Message ID: @.*** com>

-- Fiona Bryant Senior Editorial Assistant, eLife

--

elifesciences.org https://elifesciences.org

eLife Sciences Publications, Ltd is a limited liability non-profit non-stock corporation incorporated in the State of Delaware, USA, with company number 5030732, and is registered in the UK with company number FC030576 and branch number BR015634 at the address Westbrook Centre, Milton Road, Cambridge, CB4 1YG.

[JGilbert-eLife]

Of course, @FionaBryant - no problem at all! We'll hold it until next week.

[FionaBryant]

This one is also resolved now, thank you!

On Fri, 5 Apr 2024 at 16:33, JGilbert-eLife @.***> wrote:

Of course, @FionaBryant https://github.com/FionaBryant - no problem at all! We'll hold it until next week.

— Reply to this email directly, view it on GitHub https://github.com/elifesciences/enhanced-preprints-import/issues/3302#issuecomment-2040105745, or unsubscribe https://github.com/notifications/unsubscribe-auth/ARMNBZGM7UFKPGGQS6SVWJLY3276DAVCNFSM6AAAAABFF55HJKVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDANBQGEYDKNZUGU . You are receiving this because you were mentioned.Message ID: @.*** com>

-- Fiona Bryant Senior Editorial Assistant, eLife

--

elifesciences.org https://elifesciences.org

eLife Sciences Publications, Ltd is a limited liability non-profit non-stock corporation incorporated in the State of Delaware, USA, with company number 5030732, and is registered in the UK with company number FC030576 and branch number BR015634 at the address Westbrook Centre, Milton Road, Cambridge, CB4 1YG.

[JGilbert-eLife]

Cheers!