MSID: 88375 Version: 2 DOI: 10.1101/2023.05.24.542110

[nlisgo]

MSID: 88375

Version: 2

Preprint DOI: https://doi.org/10.1101/2023.05.24.542110

Step 1. Awaiting reviews

Editorial to post reviews via hypothesis

Useful links:

• DocMap: https://data-hub-api.elifesciences.org/enhanced-preprints/docmaps/v2/by-publisher/elife/get-by-manuscript-id?manuscript_id=88375
• New model tracking: https://docs.google.com/spreadsheets/d/1_fHaoOy7hjyocptKtVJRijeNpUY4hBS7Ck_aVmx6ZJk/
• Reviews on sciety: https://sciety.org/articles/activity/10.1101/2023.05.24.542110

For trouble shooting (e.g. no Docmaps available):

• DocMap issue addressing: https://miro.com/app/board/uXjVNCwK6EI=/
• Explore DataHub DocMaps API: https://lookerstudio.google.com/reporting/4c2f0368-babb-4beb-b5b3-497e7e7b0f08/page/ejphD
• Unmatched submissions and preprints: https://lookerstudio.google.com/u/0/reporting/9f86204f-3bf7-477c-9b18-5c5ef141bf69/page/p_gxi57ha93c
• Unmatched manuscripts spreadsheet: https://docs.google.com/spreadsheets/d/15QcK8w-ssB7109RQEDtFpJPZ0J5HTGxoHa_2TtpMBbg/edit#gid=1336081641

Step 2. Preview reviewed preprint

Production QC content ahead of publication

Instructions:

• QC preview: https://prod--epp.elifesciences.org/previews/88375v2
• Update ticket with any problems (add blocked label)
• When QC OK, add QC OK label to ticket and add publication date and time to https://docs.google.com/spreadsheets/d/1amAlKvdLcaDp5W8Z8g77NmkwbMF5n_u89ArSqPMO8jg
• Move card to next column
• (At end of the day post link in #enhanced-preprint and ask for PDF to be generated)

Useful links:

• Preprint DOI : https://doi.org/10.1101/2023.05.24.542110
• Confirm reviews returned by EPP: https://prod--epp.elifesciences.org/api/reviewed-preprints/88375/v2/reviews
• To update the MECA path in the docmap: https://docs.google.com/spreadsheets/d/1mctCQuNFBjSn97Lihy7_vBO6z7-N-oqyLv4clyi6zHg

Step 3: Awaiting search reindex

This step adds the reviewed preprint to the homepage: https://elifesciences.org

The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.

Useful links:

• Jenkins pipeline to reindex search can be triggered sooner or monitored here: https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/

Step 4: Published! PDF requested

Waiting for PDF to be generated

Useful links:

• PDF tracking: https://docs.google.com/spreadsheets/d/106_XeDjmuBae7gexOTNzg60lapeqjl2aRn9DzupGyS8/

Step 5: Introduce PDF to data folder and git repo

Upload PDF to relevent folder in git repo https://github.com/elifesciences/enhanced-preprints-data/

Step 6: Done!

• [ ] Kettle is on!

[fred-atherden]

Schematron:

error: <pub-id pub-id="doi"> in reference (id=c30) does not contain a valid DOI: '1007-1019.10.1016/j.neuron.2016.10.023'. error: <pub-id pub-id="doi"> in reference (id=c34) does not contain a valid DOI: '114810.10.1016/j.ejmech.2022.114810'.

[JGilbert-eLife]

@acollings There's no author response on this revised preprint. Is that correct?

[JGilbert-eLife]

Oh, never mind! Looks like there's been a snafu with this ticket - it should be a v2, but all the links etc are for the v1. https://prod--epp.elifesciences.org/reviewed-preprints/88375v2 does not work, so I assume that something has gone pretty amiss. @fred-atherden can you help here?

(The meca package is for the v1 too, so I can't correct the DOI issue yet.)

[fred-atherden]

Ah thanks @JGilbert-eLife. I've updated the ticket links and moved the meca package for the mv2 over. Obviously those schematron validation messages will be for the v1 so can be ignored.

There aren't any schematron messages for the v2.