MSID: 100851 Version: 1 DOI: 10.1101/2024.06.03.597118

[fred-atherden]

MSID: 100851

Version: 1

Preprint DOI: https://doi.org/10.1101/2024.06.03.597118

Step 1. Awaiting reviews

Editorial to post reviews via hypothesis

Useful links:

• DocMap: https://data-hub-api.elifesciences.org/enhanced-preprints/docmaps/v2/by-publisher/elife/get-by-manuscript-id?manuscript_id=100851
• New model tracking: https://docs.google.com/spreadsheets/d/1_fHaoOy7hjyocptKtVJRijeNpUY4hBS7Ck_aVmx6ZJk/
• Reviews on sciety: https://sciety.org/articles/activity/10.1101/2024.06.03.597118

For trouble shooting (e.g. no Docmaps available):

• DocMap issue addressing: https://miro.com/app/board/uXjVNCwK6EI=/
• Explore DataHub DocMaps API: https://lookerstudio.google.com/reporting/4c2f0368-babb-4beb-b5b3-497e7e7b0f08/page/ejphD
• Unmatched submissions and preprints: https://lookerstudio.google.com/u/0/reporting/9f86204f-3bf7-477c-9b18-5c5ef141bf69/page/p_gxi57ha93c
• Unmatched manuscripts spreadsheet: https://docs.google.com/spreadsheets/d/15QcK8w-ssB7109RQEDtFpJPZ0J5HTGxoHa_2TtpMBbg/edit#gid=1336081641

Step 2. Preview reviewed preprint

Production QC content ahead of publication

Instructions:

• QC preview: https://prod--epp.elifesciences.org/previews/100851v1
• Update ticket with any problems (add blocked label)
• When QC OK, add QC OK label to ticket and add publication date and time to https://docs.google.com/spreadsheets/d/1amAlKvdLcaDp5W8Z8g77NmkwbMF5n_u89ArSqPMO8jg
• Move card to next column
• (At end of the day post link in #enhanced-preprint and ask for PDF to be generated)

Useful links:

• Preprint DOI : https://doi.org/10.1101/2024.06.03.597118
• Confirm reviews returned by EPP: https://prod--epp.elifesciences.org/api/reviewed-preprints/100851/v1/reviews
• To update the MECA path in the docmap: https://docs.google.com/spreadsheets/d/1mctCQuNFBjSn97Lihy7_vBO6z7-N-oqyLv4clyi6zHg

Step 3: Awaiting search reindex

This step adds the reviewed preprint to the homepage: https://elifesciences.org

The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.

Useful links:

• Jenkins pipeline to reindex search can be triggered sooner or monitored here: https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/

Step 4: Published! PDF requested

Waiting for PDF to be generated

Useful links:

• PDF tracking: https://docs.google.com/spreadsheets/d/106_XeDjmuBae7gexOTNzg60lapeqjl2aRn9DzupGyS8/

Step 5: Introduce PDF to data folder and git repo

Upload PDF to relevent folder in git repo https://github.com/elifesciences/enhanced-preprints-data/

Step 6: Done!

• [ ] Kettle is on!

[elife-bot]

elife-bot workflow message:

ValidateJatsDtd, validation error for version DOI 10.7554/eLife.100851.1 file tmp/2024-10-28.11.30.35.Publish.IngestMeca_100851.ValidateJatsDtd/input_dir/content/597118.xml: [{'line': '1721', 'column': '20', 'message': "The content of element type 'source' must match '(email|ext-link|uri|inline-supplementary-material|related-article|related-object|hr|bold|fixed-case|italic|monospace|overline|overline-start|overline-end|roman|sans-serif|sc|strike|underline|underline-start|underline-end|ruby|alternatives|inline-graphic|inline-media|private-char|chem-struct|inline-formula|tex-math|mml:math|abbrev|index-term|index-term-range-end|milestone-end|milestone-start|named-content|styled-content|fn|target|xref|sub|sup|x|break)'."}]

[elife-bot]

- error: [article-contrib-group] article-meta must contain one (and only one) <contrib-group> element.
! warning: [aff-no-country] Affiliation does not contain a country element: 3Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen, Nijmegen, Netherlands
! warning: [aff-no-country] Affiliation does not contain a country element: 11Department of Clinical Sciences, Cornell College of Veterinary Medicine, Cornell University, Ithaca, New York
! warning: [journal-source-2] Journal reference (id c20) has a source that starts with a roman numeral. Is part of the article-title captured in source? Source = I. Anatomy, architecture, and volumetrics. Journal of Comparative Neurology.
+ info: [article-version-flag] This is preprint version 1.2.
! warning: [ed-report-kwd-group-2] evidence-strength type kwd-group has 2 keywords: Convincing; Incomplete. This is unusual, please check this is correct.

[fred-atherden]

WOS query sent

[fred-atherden]

chased