MSID: 95510 Version: 2 DOI: 10.1101/2023.10.17.562203

[fred-atherden]

MSID: 95510

Version: 2

Preprint DOI: https://doi.org/10.1101/2023.10.17.562203

Step 1. Awaiting reviews

Editorial to post reviews via hypothesis

Useful links:

• DocMap: https://data-hub-api.elifesciences.org/enhanced-preprints/docmaps/v2/by-publisher/elife/get-by-manuscript-id?manuscript_id=95510
• New model tracking: https://docs.google.com/spreadsheets/d/1_fHaoOy7hjyocptKtVJRijeNpUY4hBS7Ck_aVmx6ZJk/
• Reviews on sciety: https://sciety.org/articles/activity/10.1101/2023.10.17.562203

For trouble shooting (e.g. no Docmaps available):

• DocMap issue addressing: https://miro.com/app/board/uXjVNCwK6EI=/
• Explore DataHub DocMaps API: https://lookerstudio.google.com/reporting/4c2f0368-babb-4beb-b5b3-497e7e7b0f08/page/ejphD
• Unmatched submissions and preprints: https://lookerstudio.google.com/u/0/reporting/9f86204f-3bf7-477c-9b18-5c5ef141bf69/page/p_gxi57ha93c
• Unmatched manuscripts spreadsheet: https://docs.google.com/spreadsheets/d/15QcK8w-ssB7109RQEDtFpJPZ0J5HTGxoHa_2TtpMBbg/edit#gid=1336081641

Step 2. Preview reviewed preprint

Production QC content ahead of publication

Instructions:

• QC preview: https://prod--epp.elifesciences.org/previews/95510v2
• Update ticket with any problems (add blocked label)
• When QC OK, add QC OK label to ticket and add publication date and time to https://docs.google.com/spreadsheets/d/1amAlKvdLcaDp5W8Z8g77NmkwbMF5n_u89ArSqPMO8jg
• Move card to next column
• (At end of the day post link in #enhanced-preprint and ask for PDF to be generated)

Useful links:

• Preprint DOI : https://doi.org/10.1101/2023.10.17.562203
• Confirm reviews returned by EPP: https://prod--epp.elifesciences.org/api/reviewed-preprints/95510/v2/reviews
• To update the MECA path in the docmap: https://docs.google.com/spreadsheets/d/1mctCQuNFBjSn97Lihy7_vBO6z7-N-oqyLv4clyi6zHg

Step 3: Awaiting search reindex

This step adds the reviewed preprint to the homepage: https://elifesciences.org

The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.

Useful links:

• Jenkins pipeline to reindex search can be triggered sooner or monitored here: https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/

Step 4: Published! PDF requested

Waiting for PDF to be generated

Useful links:

• PDF tracking: https://docs.google.com/spreadsheets/d/106_XeDjmuBae7gexOTNzg60lapeqjl2aRn9DzupGyS8/

Step 5: Introduce PDF to data folder and git repo

Upload PDF to relevent folder in git repo https://github.com/elifesciences/enhanced-preprints-data/

Step 6: Done!

• [ ] Kettle is on!

[elife-bot]

- error: [ed-report-bold-terms-1] Bold phrase in eLife Assessment - Life Assessment - is not one of the permitted terms from the vocabulary. Should the bold formatting be removed? These are currently bolded terms landmark, fundamental, important, valuable, useful, exceptional, compelling, convincing, convincingly, solid, incomplete, incompletely, inadequate, inadequately
! warning: [journal-ref-text-content] This journal reference (id c7) has untagged textual content - mag; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c32) has untagged textual content - ott; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c59) has untagged textual content - [cited 2021 Dec 2];. Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c61) has untagged textual content - [cited 2023 Feb 13];. Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c62) has untagged textual content - [cited 2021 Jun 11]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c66) has untagged textual content - [cited 2022 Aug 15]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c68) has untagged textual content - [cited 2021 Jun 11]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c69) has untagged textual content - [cited 2023 Apr 19]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c71) has untagged textual content - [cited 2023 Oct 11]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c73) has untagged textual content - [cited 2023 Oct 12]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c76) has untagged textual content - [cited 2022 Feb 1]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c78) has untagged textual content - [cited 2021 Jun 17]; . Is it tagged correctly?
! warning: [journal-ref-text-content] This journal reference (id c79) has untagged textual content - [cited 2021 Jul 31]; . Is it tagged correctly?
! warning: [mixed-citation-person-group-flag-2] mixed-citation in reference (id=c57) does not have an author person-group. Is that correct?
+ info: [article-version-flag] This is preprint version 1.3.
! warning: [empty-parentheses-presence] p element contains empty parentheses ('[]', or '()'). Is there a missing citation within the parentheses? Or perhaps this is a piece of code that needs formatting?
! warning: [empty-parentheses-presence] p element contains empty parentheses ('[]', or '()'). Is there a missing citation within the parentheses? Or perhaps this is a piece of code that needs formatting?

[fred-atherden]

(Edited typo relating to this - error: [ed-report-bold-terms-1] Bold phrase in eLife Assessment - Life Assessment -

will need to wait for the change to update)

[JGilbert-eLife]

Fixed schematron, waiting for typo to be updated.