MSID: 102412 Version: 1 DOI: 10.1101/2024.09.09.612112

[fred-atherden]

MSID: 102412

Version: 1

Preprint DOI: https://doi.org/10.1101/2024.09.09.612112

Step 1. Awaiting reviews

Editorial to post reviews via hypothesis

Useful links:

• DocMap: https://data-hub-api.elifesciences.org/enhanced-preprints/docmaps/v2/by-publisher/elife/get-by-manuscript-id?manuscript_id=102412
• New model tracking: https://docs.google.com/spreadsheets/d/1_fHaoOy7hjyocptKtVJRijeNpUY4hBS7Ck_aVmx6ZJk/
• Reviews on sciety: https://sciety.org/articles/activity/10.1101/2024.09.09.612112

For trouble shooting (e.g. no Docmaps available):

• DocMap issue addressing: https://miro.com/app/board/uXjVNCwK6EI=/
• Explore DataHub DocMaps API: https://lookerstudio.google.com/reporting/4c2f0368-babb-4beb-b5b3-497e7e7b0f08/page/ejphD
• Unmatched submissions and preprints: https://lookerstudio.google.com/u/0/reporting/9f86204f-3bf7-477c-9b18-5c5ef141bf69/page/p_gxi57ha93c
• Unmatched manuscripts spreadsheet: https://docs.google.com/spreadsheets/d/15QcK8w-ssB7109RQEDtFpJPZ0J5HTGxoHa_2TtpMBbg/edit#gid=1336081641

Step 2. Preview reviewed preprint

Production QC content ahead of publication

Instructions:

• QC preview: https://prod--epp.elifesciences.org/previews/102412v1
• Update ticket with any problems (add blocked label)
• When QC OK, add QC OK label to ticket and add publication date and time to https://docs.google.com/spreadsheets/d/1amAlKvdLcaDp5W8Z8g77NmkwbMF5n_u89ArSqPMO8jg
• Move card to next column
• (At end of the day post link in #enhanced-preprint and ask for PDF to be generated)

Useful links:

• Preprint DOI : https://doi.org/10.1101/2024.09.09.612112
• Confirm reviews returned by EPP: https://prod--epp.elifesciences.org/api/reviewed-preprints/102412/v1/reviews
• To update the MECA path in the docmap: https://docs.google.com/spreadsheets/d/1mctCQuNFBjSn97Lihy7_vBO6z7-N-oqyLv4clyi6zHg

Step 3: Awaiting search reindex

This step adds the reviewed preprint to the homepage: https://elifesciences.org

The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.

Useful links:

• Jenkins pipeline to reindex search can be triggered sooner or monitored here: https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/

Step 4: Published! PDF requested

Waiting for PDF to be generated

Useful links:

• PDF tracking: https://docs.google.com/spreadsheets/d/106_XeDjmuBae7gexOTNzg60lapeqjl2aRn9DzupGyS8/

Step 5: Introduce PDF to data folder and git repo

Upload PDF to relevent folder in git repo https://github.com/elifesciences/enhanced-preprints-data/

Step 6: Done!

• [ ] Kettle is on!

[elife-bot]

- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/01cwqze88; https://ror.org/02jzrsm59; https://ror.org/04xeg9z08 in 1 https://ror.org/01cwqze88 https://ror.org/02jzrsm59 https://ror.org/04xeg9z08 Section on Neural Circuits, National Institute of Alcohol Abuse and Alcoholism, National Institutes of Health, Bethesda, MD 20892, USA
- error: [aff-multiple-country] Affiliation contains more than one country element: Hungary; Hungary in 2 https://ror.org/03zwxja46 https://ror.org/04q42nz13 https://ror.org/04w6pnc49 Institute of Cognitive Neuroscience and Psychology, Research Centre for Natural Sciences, Eötvös Loránd Research Network, Budapest, Hungary; Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, Budapest, Hungary
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/03zwxja46; https://ror.org/04q42nz13; https://ror.org/04w6pnc49 in 2 https://ror.org/03zwxja46 https://ror.org/04q42nz13 https://ror.org/04w6pnc49 Institute of Cognitive Neuroscience and Psychology, Research Centre for Natural Sciences, Eötvös Loránd Research Network, Budapest, Hungary; Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, Budapest, Hungary
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/05v9kya57; https://ror.org/01jsq2704 in 3 https://ror.org/05v9kya57 https://ror.org/01jsq2704 Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, Budapest, Hungary
- error: [aff-institution-wrap-test-3] institution-wrap cannot contain text. It can only contain elements.
- error: [permissions-test-4] permissions must contain an ali:free_to_read element. https://elifeproduction.slab.com/posts/licensing-and-copyright-rqdavyty#permissions-test-4
- error: [permissions-test-5] permissions must contain license.
- error: [permissions-test-9] license does not have an @xlink:href which is equal to 'http://creativecommons.org/publicdomain/zero/1.0/' or 'http://creativecommons.org/licenses/by/4.0/'. https://elifeproduction.slab.com/posts/licensing-and-copyright-rqdavyty#permissions-test-9
! warning: [aff-multiple-institution] Affiliation contains more than one institution element: Institute of Cognitive Neuroscience and Psychology, Research Centre for Natural Sciences, Eötvös Loránd Research Network; Faculty of Information Technology and Bionics, Pázmány Péter Catholic University in 2 https://ror.org/03zwxja46 https://ror.org/04q42nz13 https://ror.org/04w6pnc49 Institute of Cognitive Neuroscience and Psychology, Research Centre for Natural Sciences, Eötvös Loránd Research Network, Budapest, Hungary; Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, Budapest, Hungary
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! warning: [mixed-citation-other-publication-flag] mixed-citation in reference (id=c29) has a publication-type='other'. Is that correct?
+ info: [article-version-flag] This is preprint version 1.1.
! warning: [author-fn-5] footnote with id n1 has the fn-type 'others' which is not one of the known values (abbr; con; coi-statement; deceased; equal; financial-disclosure; presented-at; present-address; supported-by). Should it be changed to be one of the values? "5Lead contact"
! warning: [ed-report-kwd-group-2] evidence-strength type kwd-group has 2 keywords: Incomplete; Solid. This is unusual, please check this is correct.