MSID: 94590 Version: 2 DOI: 10.21203/rs.3.rs-3191814/v3

fred-atherden commented 1 week ago

MSID: 94590

Version: 2

Preprint DOI: https://doi.org/10.21203/rs.3.rs-3191814/v3

Step 1. Awaiting reviews

Editorial to post reviews via hypothesis

Useful links:

DocMap: https://data-hub-api.elifesciences.org/enhanced-preprints/docmaps/v2/by-publisher/elife/get-by-manuscript-id?manuscript_id=94590
New model tracking: https://docs.google.com/spreadsheets/d/1_fHaoOy7hjyocptKtVJRijeNpUY4hBS7Ck_aVmx6ZJk/
Reviews on sciety: https://sciety.org/articles/activity/10.21203/rs.3.rs-3191814/v3

For trouble shooting (e.g. no Docmaps available):

DocMap issue addressing: https://miro.com/app/board/uXjVNCwK6EI=/
Explore DataHub DocMaps API: https://lookerstudio.google.com/reporting/4c2f0368-babb-4beb-b5b3-497e7e7b0f08/page/ejphD
Unmatched submissions and preprints: https://lookerstudio.google.com/u/0/reporting/9f86204f-3bf7-477c-9b18-5c5ef141bf69/page/p_gxi57ha93c
Unmatched manuscripts spreadsheet: https://docs.google.com/spreadsheets/d/15QcK8w-ssB7109RQEDtFpJPZ0J5HTGxoHa_2TtpMBbg/edit#gid=1336081641

Step 2. Preview reviewed preprint

Production QC content ahead of publication

Instructions:

QC preview: https://prod--epp.elifesciences.org/previews/94590v2
Update ticket with any problems (add blocked label)
When QC OK, add QC OK label to ticket and add publication date and time to https://docs.google.com/spreadsheets/d/1amAlKvdLcaDp5W8Z8g77NmkwbMF5n_u89ArSqPMO8jg
Move card to next column
(At end of the day post link in #enhanced-preprint and ask for PDF to be generated)

Useful links:

Preprint DOI : https://doi.org/10.21203/rs.3.rs-3191814/v3
Confirm reviews returned by EPP: https://prod--epp.elifesciences.org/api/reviewed-preprints/94590/v2/reviews
To update the MECA path in the docmap: https://docs.google.com/spreadsheets/d/1mctCQuNFBjSn97Lihy7_vBO6z7-N-oqyLv4clyi6zHg

Step 3: Awaiting search reindex

This step adds the reviewed preprint to the homepage: https://elifesciences.org

The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.

Useful links:

Jenkins pipeline to reindex search can be triggered sooner or monitored here: https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/

Step 4: Published! PDF requested

Waiting for PDF to be generated

Useful links:

PDF tracking: https://docs.google.com/spreadsheets/d/106_XeDjmuBae7gexOTNzg60lapeqjl2aRn9DzupGyS8/

Step 5: Introduce PDF to data folder and git repo

Upload PDF to relevent folder in git repo https://github.com/elifesciences/enhanced-preprints-data/

Step 6: Done!

[ ] Kettle is on!

elife-bot commented 18 hours ago

elife-bot workflow message:

ValidateJatsDtd, validation error for version DOI 10.7554/eLife.94590.2 file tmp/2024-11-14.12.31.36.Publish.IngestMeca_94590.ValidateJatsDtd/input_dir/3191814/3191814.xml: [{'line': '410', 'column': '16', 'message': "The content of element type 'article-meta' must match '(article-id,(article-version|article-version-alternatives)?,article-categories?,title-group?,(contrib-group|aff|aff-alternatives|x),author-notes?,(pub-date|pub-date-not-available?),volume,volume-id,volume-series?,issue,issue-id,issue-title,issue-title-group,issue-sponsor,issue-part?,volume-issue-group,isbn,supplement?,(((fpage,lpage?)?,page-range?)|elocation-id)?,(email|ext-link|uri|product|supplementary-material),history?,pub-history?,permissions?,self-uri,(related-article|related-object),abstract,trans-abstract,kwd-group,funding-group,support-group,conference*,counts?,custom-meta-group?)'."}]

elife-bot commented 18 hours ago

- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/04rxrdv16; https://ror.org/043vr8e29; https://ror.org/04zdays56 in 1 https://ror.org/04rxrdv16 https://ror.org/043vr8e29 https://ror.org/04zdays56 Tumour-Stroma Signalling Lab., Centro de Investigación del Cáncer, Instituto de Biología Molecular y Celular del Cáncer, Consejo Superior de Investigaciones Científicas (CSIC)-Universidad de Salamanca, Campus Miguel de Unamuno, 37007 Salamanca, Spain
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/026zzn846; https://ror.org/04cw6st05; https://ror.org/04489at23 in 2 https://ror.org/026zzn846 https://ror.org/04cw6st05 https://ror.org/04489at23 Centre for Cancer and Inflammation, Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London EC1M 6BQ, United Kingdom.
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/026zzn846; https://ror.org/04cw6st05; https://ror.org/0574dzy90 in 3 https://ror.org/026zzn846 https://ror.org/04cw6st05 https://ror.org/0574dzy90 Centre for Microvascular Research, William Harvey Research Institute, Queen Mary University of London, Charterhouse Square, London, EC1M 6BQ, United Kingdom.
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/021018s57; https://ror.org/052g8jq94 in 4 https://ror.org/021018s57 https://ror.org/052g8jq94 Unit of Biophysics and Bioengineering, Department of Biomedicine, School of Medicine and Health Sciences, Universitat de Barcelona, Barcelona, Spain
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/026zzn846; https://ror.org/04cw6st05; https://ror.org/04489at23 in 5 https://ror.org/026zzn846 https://ror.org/04cw6st05 https://ror.org/04489at23 Centre for Cancer Genomics and Computational Biology, Cell Signalling and Proteomics Laboratory, Barts Cancer Institute, Queen Mary University of London, Charterhouse Square, London EC1M 6BQ, United Kingdom.
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/04rxrdv16; https://ror.org/043vr8e29; https://ror.org/04zdays56 in 6 https://ror.org/04rxrdv16 https://ror.org/043vr8e29 https://ror.org/04zdays56 Bioinformatics and Functional Genomics, Centro de Investigación del Cáncer, Instituto de Biología Molecular y Celular del Cáncer, Consejo Superior de Investigaciones Científicas (CSIC)-Universidad de Salamanca, Campus Miguel de Unamuno, 37007 Salamanca, Spain
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/02x5c5y60; https://ror.org/004g03602 in 7 https://ror.org/02x5c5y60 https://ror.org/004g03602 Inflammation and Macrophage Plasticity Lab, CIC bioGUNE, Derio, Spain.
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/03kpps236; https://ror.org/056h71x09; https://ror.org/04bpz1v84 in 9 https://ror.org/03kpps236 https://ror.org/056h71x09 https://ror.org/04bpz1v84 Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona 08028, Spain.
- error: [aff-multiple-ids] Affiliation contains more than one institution-id element: https://ror.org/02f40zc51; https://ror.org/04rxrdv16; https://ror.org/043vr8e29 in 11 https://ror.org/02f40zc51 https://ror.org/04rxrdv16 https://ror.org/043vr8e29 Pathology Unit, Centro de Investigación del Cáncer, Instituto de Biología Molecular y Celular del Cáncer, Universidad de Salamanca, Campus Miguel de Unamuno, 37007 Salamanca, Spain
- error: [aff-institution-wrap-test-3] institution-wrap cannot contain text. It can only contain elements.
- error: [aff-institution-wrap-test-3] institution-wrap cannot contain text. It can only contain elements.
+ info: [article-version-flag] This is preprint version 1.3.
+ info: [permissions-info] This article is licensed under a CC BY 4.0 license. http://creativecommons.org/licenses/by/4.0/ https://elifeproduction.slab.com/posts/licensing-and-copyright-rqdavyty#permissions-info

elifesciences / publish-reviewed-preprints-issues