MSID: 97543 Version: 2 DOI: 10.21203/rs.3.rs-3329601/v2

fred-atherden commented 1 week ago

MSID: 97543

Version: 2

Preprint DOI: https://doi.org/10.21203/rs.3.rs-3329601/v2

Step 1. Awaiting reviews

Editorial to post reviews via hypothesis

Useful links:

DocMap: https://data-hub-api.elifesciences.org/enhanced-preprints/docmaps/v2/by-publisher/elife/get-by-manuscript-id?manuscript_id=97543
New model tracking: https://docs.google.com/spreadsheets/d/1_fHaoOy7hjyocptKtVJRijeNpUY4hBS7Ck_aVmx6ZJk/
Reviews on sciety: https://sciety.org/articles/activity/10.21203/rs.3.rs-3329601/v2

For trouble shooting (e.g. no Docmaps available):

DocMap issue addressing: https://miro.com/app/board/uXjVNCwK6EI=/
Explore DataHub DocMaps API: https://lookerstudio.google.com/reporting/4c2f0368-babb-4beb-b5b3-497e7e7b0f08/page/ejphD
Unmatched submissions and preprints: https://lookerstudio.google.com/u/0/reporting/9f86204f-3bf7-477c-9b18-5c5ef141bf69/page/p_gxi57ha93c
Unmatched manuscripts spreadsheet: https://docs.google.com/spreadsheets/d/15QcK8w-ssB7109RQEDtFpJPZ0J5HTGxoHa_2TtpMBbg/edit#gid=1336081641

Step 2. Preview reviewed preprint

Production QC content ahead of publication

Instructions:

QC preview: https://prod--epp.elifesciences.org/previews/97543v2
Update ticket with any problems (add blocked label)
When QC OK, add QC OK label to ticket and add publication date and time to https://docs.google.com/spreadsheets/d/1amAlKvdLcaDp5W8Z8g77NmkwbMF5n_u89ArSqPMO8jg
Move card to next column
(At end of the day post link in #enhanced-preprint and ask for PDF to be generated)

Useful links:

Preprint DOI : https://doi.org/10.21203/rs.3.rs-3329601/v2
Confirm reviews returned by EPP: https://prod--epp.elifesciences.org/api/reviewed-preprints/97543/v2/reviews
To update the MECA path in the docmap: https://docs.google.com/spreadsheets/d/1mctCQuNFBjSn97Lihy7_vBO6z7-N-oqyLv4clyi6zHg

Step 3: Awaiting search reindex

This step adds the reviewed preprint to the homepage: https://elifesciences.org

The search reindex is triggered once an hour. We need the reviewed preprint to be indexed as the search application serves the journal homepage.

Useful links:

Jenkins pipeline to reindex search can be triggered sooner or monitored here: https://alfred.elifesciences.org/job/process/job/process-reindex-reviewed-preprints/

Step 4: Published! PDF requested

Waiting for PDF to be generated

Useful links:

PDF tracking: https://docs.google.com/spreadsheets/d/106_XeDjmuBae7gexOTNzg60lapeqjl2aRn9DzupGyS8/

Step 5: Introduce PDF to data folder and git repo

Upload PDF to relevent folder in git repo https://github.com/elifesciences/enhanced-preprints-data/

Step 6: Done!

[ ] Kettle is on!

fred-atherden commented 2 days ago

The reviews for the reviewed preprint v1 were posted to v2 on Research square. These reviews (for the Reviewed preprint v2) were also posted to the v2 on Research square.

I see the authors have also posted a v3 on Research Square and submitted an R2.

@acollings I will delete the reviews that have been recently posted, as they are currently appearing on the RP v1. Do you know if the versions up on Research Square correspond to the submissions we've received? Or are we missing a version for the R1 submission?

acollings commented 2 days ago

Hi @fred-atherden we have V3 in progress, which corresponds to preprint v3. I'd use preprint V2 for this version, and move the reviews for the V1 to the preprint v1. Is that possible?

fred-atherden commented 2 days ago

@acollings, thanks yes that's possible (and looks to align with the versions we generated MECAs for too). I will move the v1 reviews over to the v1.

Would it be possible to repost the V2 reviews with new IDs? Since I have deleted them now I expect we'll need new ones.

acollings commented 2 days ago

Hi @fred-atherden I think this is done!

fred-atherden commented 2 days ago

Thanks!

elife-bot commented 2 days ago

elife-bot workflow message:

ValidateJatsDtd, validation error for version DOI 10.7554/eLife.97543.2 file tmp/2024-11-14.16.30.34.Publish.IngestMeca_97543.ValidateJatsDtd/input_dir/3329601/3329601.xml: [{'line': '190', 'column': '16', 'message': "The content of element type 'article-meta' must match '(article-id,(article-version|article-version-alternatives)?,article-categories?,title-group?,(contrib-group|aff|aff-alternatives|x),author-notes?,(pub-date|pub-date-not-available?),volume,volume-id,volume-series?,issue,issue-id,issue-title,issue-title-group,issue-sponsor,issue-part?,volume-issue-group,isbn,supplement?,(((fpage,lpage?)?,page-range?)|elocation-id)?,(email|ext-link|uri|product|supplementary-material),history?,pub-history?,permissions?,self-uri,(related-article|related-object),abstract,trans-abstract,kwd-group,funding-group,support-group,conference*,counts?,custom-meta-group?)'."}]

elife-bot commented 2 days ago

- error: [aff-institution-wrap-test-3] institution-wrap cannot contain text. It can only contain elements.
- error: [aff-institution-wrap-test-3] institution-wrap cannot contain text. It can only contain elements.
! warning: [aff-no-country] Affiliation does not contain a country element: https://ror.org/033vjfk17 Wuhan University
! warning: [aff-no-country] Affiliation does not contain a country element: https://ror.org/0040axw97 Yunnan University
+ info: [article-version-flag] This is preprint version 1.2.
+ info: [permissions-info] This article is licensed under a CC BY 4.0 license. http://creativecommons.org/licenses/by/4.0/ https://elifeproduction.slab.com/posts/licensing-and-copyright-rqdavyty#permissions-info

elifesciences / publish-reviewed-preprints-issues