If the workflow contains one or more outputs of array type then WES does not match the patter in the cwl-TES logs and the output list returned is empty (Issue #206).
Documentation
The regular expression pattern that recognizes outputs in the cwl-TES log was changed to recognize brackets as well as curly brackets. This covers all cases when the outputs contain one or more values. This is a quick and dirty solution, until something more appropriate is implemented.
Details
If the workflow contains one or more outputs of array type then WES does not match the patter in the cwl-TES logs and the output list returned is empty (Issue #206).
Documentation
The regular expression pattern that recognizes outputs in the cwl-TES log was changed to recognize brackets as well as curly brackets. This covers all cases when the outputs contain one or more values. This is a quick and dirty solution, until something more appropriate is implemented.
Closing issues
closes #206
Credit Kostis Zagganas