Simpler structure reflecting the latest decisions, including the creation of a Python library that can be used by a data broker platform of choice. (this could ARC, Galaxy or a webapp to be made)
Highlighting the difference between the Data broker - Data broker platform - MARS-CLI
Introduction of the MARS-CLI backbone based on code written by Marcos (biosamples_external_references.py) (Thanks @kdp-cloud )
Taking out old links and files from BioHackathon
Hosting the repository services in one folder called repository-services including isajson-biosamples and isajson-ena. Accompanied with a docker compose and a README to set them up
README explaining some components of MARS
ISA-JSON as metadata carrier
Data broker platform
MARS-CLI
ISA-JSON support by repositories
Test data bundled together in the test-data folder
Description of the stakeholders updated and moved to a separate file
Taking out the code for the JS webapp, since currently not compatible with the Python Library route we decided to take. Can be brought back in if possible.
Main differences are:
repository-servicesincludingisajson-biosamplesandisajson-ena. Accompanied with a docker compose and a README to set them uptest-datafolderPREVIEW the repo structure here