Dockerfile fix - Githubissues

elixir-europe / plant-brapi-to-isa

BSD 3-Clause "New" or "Revised" License

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Dockerfile fix #44

Closed bedroesb closed 5 years ago

bedroesb commented 5 years ago

Usage for your own endpoint:

docker-compose build && docker-compose run BrAPI2ISA -t <your trial DbId> -e <your endpoint>

Usage for testing:

docker-compose build && docker-compose run <>

Where <> can be following values:

test_trial
test_study
test_studies_notrial
test_pippa

Usage when only used for own endpoint:

docker build -t brapi2isa -f Dockerfile .
docker run -it -v outputdir:/outputdir brapi2isa -t <your trial DbId> -e <your endpoint>

NOTE: volume mount not yet working in this situation