search

elizabethmcd / metabolisHMM

Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs
GNU General Public License v3.0
17 stars 5 forks source link

Option for corresponding tree from single phylogeny #24

Closed elizabethmcd closed 4 years ago

elizabethmcd commented 4 years ago

Add option for RIBO=TRUE if want a corresponding ribosomal tree of only the genomes that have a specific marker in the single-marker-phylogeny workflow.

Gets the genomes to make the tree from by making a list from either the hits list or the .faa of hits with the '>' header, and then makes the corresponding tree