elizabethng / predator-diets

Code used to perform the analyses in "Predator stomach contents can provide accurate indices of prey biomass"
https://academic.oup.com/icesjms/article/78/3/1146/6145864
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Add spatial only model to config file #39

Closed elizabethng closed 5 years ago

elizabethng commented 5 years ago

For model selection, to see if spatial variation is warranted too (in the first component, that would be FieldConfig = c(1, 0, 0, 0)

elizabethng commented 5 years ago

Can also probably just do the gamma models, since those basically fit the best for everything.

Need

Model selection for additive mixed models (form Zuur)

  1. Parameterize models with all fixed components we could possibly want ("beyond optimal")
  2. Fit different random structures using REML
  3. Check random effect variances and select the best random structure
  4. Fit different fixed effects models using ML and compare
  5. Re-fit the best model using REML
elizabethng commented 5 years ago
elizabethng commented 5 years ago

See other notes in https://github.com/elizabethng/predator-diets/issues/40

elizabethng commented 5 years ago

Added spatial only and non-spatial model in https://github.com/elizabethng/predator-diets/pull/50/commits/5cb2a6e092656e15a44632b5e050d1d69b7f4c1f