ellessenne / comorbidity

An R package for computing comorbidity scores.
https://ellessenne.github.io/comorbidity/
GNU General Public License v3.0
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Using comorbidity 0.5.3 #76

Closed sk123-ux closed 3 months ago

sk123-ux commented 3 months ago

Hello,

I want to use comorbidity 0.5.3 for a particular dataset so I reverted the package to the older version using:

remotes::install_github("ellessenne/comorbidity@0.5.3")

However, when I try to use the older code (which displays the scores and weight scores as part of the mapping function) I encounter an error.

Using newer code with comorbidity 0.5.3 works successfully

com <- comorbidity(x = my_data, id = "SAMDS", code = "Code", map = "charlson_icd10_quan", assign0 = FALSE) View(com)

Using older code with comorbidity 0.5.3 does not work and produces the following error

com <- comorbidity(x = my_data, id = "SAMDS", code = "Code", score = "charlson", icd = "icd10", assign0 = FALSE) View(com)

Error in comorbidity(x = sim_data, id = "SAMDS", code = "Code", score = "charlson", : unused arguments (score = "charlson", icd = "icd10")

Is there still a supported method of using comorbidity version 0.5.3?

ellessenne commented 3 months ago

Hi, I cannot reproduce the issue but I suspect it may be enough to just restart your R session before installing the old version. Could you try that?

sk123-ux commented 3 months ago

Hello, yes it does. Thanks for your work on the package and for helping to fix this simple error.

ellessenne commented 3 months ago

That's good to hear, thanks for checking and confirming that!