ellisrichardj / BovTB-nf

Nextflow script for processing WGS data
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Add process to ID samples that are not M. bovis #12

Closed ellisrichardj closed 5 years ago

ellisrichardj commented 5 years ago

Suggest run kraken on samples that do not give expected result

ellisrichardj commented 5 years ago

Suggest kraken2 (https://github.com/DerrickWood/kraken2)