Shinichi's to-do

[itchyshin]

• [x] Adding names to combined orchard plot (probably try to improve the functions
• [x] Adding marginal mean functions once @elmacartney do multi-moderator models

[elmacartney]

@itchyshin I've added the multimoderator models to each of the three 'main' meta-regressions. They are on the RMD file under 'full models'

[itchyshin]

@elmacartney - great! 👍 - probably I will see whether I have a time to work on this and explain to you at our meeting

[itchyshin]

@itchyshin (and @elmacartney + @mlagisz ) to-do list

• [x] @elmacartney Here is JEB paper and here are some papers which used AIC model selection (here and here)
• [x] Check adjusted values - @elmacartney to send @itchyshin the paper in question
• [x] Look at the MS (before the next meeting)
• [ ] minor: 1) add some code in emmeans code and 2) to make sure Stain = unknown is fine (check the effect)
• [x] @elmacartney to read the publication bias pre-print
• [x] And we discuss publication bias and sensitivity analysis (@itchyshin to look at what's done so far).
• [x] @elmacartney to talk to @mlagisz and sort out Age and also a conceptual figure (showing the main and interaction stuff will be a key to this paper).

@elmacartney - please feel free to add to the list

[elmacartney]

@itchyshin Here is the paper (and raw data) for the paper with negative values

https://www.nature.com/articles/s41467-020-19874-8

https://unsw-my.sharepoint.com/:x:/g/personal/z3439723_ad_unsw_edu_au/EbHgfX1Zn3FMuUxJpq5cg-8BpljQVjlN-PugvtZZxCrIJA?e=YOh29l

[elmacartney]

@itchyshin I will work on PB tomorrow. After reading pre-print, is it best to use effective sample size?

[itchyshin]

@elmacartney - yes, if you get to the supplementary materials, you will see how it can be done.

[elmacartney]

@itchyshin Do you think you could potentially write the methods section on the multimoderator models and getting the weights for models with delta AIC < 2? I think this might help me understand it a bit better in order to write the results for it. I'm still a bit confused by what the weights actually represent and if the delta AIC represents the inclusion/exclusion of the single moderator from the full model?

[itchyshin]

Sure @elmacartney - will try to do this before our meeting (but I will try to read your intro first - a busy week ahead - the last week of teaching).

[elmacartney]

Great, thanks!

On Mon, Aug 2, 2021 at 4:53 PM Shinichi Nakagawa @.***> wrote:

Sure @elmacartney https://github.com/elmacartney - will try to do this before our meeting (but I will try to read your intro first - a busy week ahead - the last week of teaching).

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[itchyshin]

I am closing this for now